Protein–RNA interactions for Protein: P15379

Cd44, CD44 antigen, mousemouse

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44P15379 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cd44P15379 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Cd44P15379 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cd44P15379 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.99■□□□□ 0.63
Cd44P15379 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.99■□□□□ 0.63
Cd44P15379 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cd44P15379 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cd44P15379 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cd44P15379 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
Cd44P15379 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Cd44P15379 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cd44P15379 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cd44P15379 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cd44P15379 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cd44P15379 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.98■□□□□ 0.63
Cd44P15379 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cd44P15379 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cd44P15379 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Cd44P15379 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cd44P15379 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.98■□□□□ 0.63
Cd44P15379 Gm6420-201ENSMUST00000193885 723 ntBASIC18.98■□□□□ 0.63
Cd44P15379 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cd44P15379 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Cd44P15379 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cd44P15379 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cd44P15379 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cd44P15379 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cd44P15379 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cd44P15379 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cd44P15379 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cd44P15379 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cd44P15379 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Cd44P15379 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cd44P15379 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cd44P15379 Nespas-201ENSMUST00000143738 1083 ntBASIC18.97■□□□□ 0.63
Cd44P15379 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
Cd44P15379 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.97■□□□□ 0.63
Cd44P15379 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cd44P15379 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Cd44P15379 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cd44P15379 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cd44P15379 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cd44P15379 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cd44P15379 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cd44P15379 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.96■□□□□ 0.63
Cd44P15379 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.96■□□□□ 0.63
Cd44P15379 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cd44P15379 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cd44P15379 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cd44P15379 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.96■□□□□ 0.63
Cd44P15379 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.96■□□□□ 0.63
Cd44P15379 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Cd44P15379 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cd44P15379 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cd44P15379 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
Cd44P15379 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.95■□□□□ 0.62
Cd44P15379 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cd44P15379 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cd44P15379 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.95■□□□□ 0.62
Cd44P15379 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cd44P15379 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cd44P15379 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.95■□□□□ 0.62
Cd44P15379 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cd44P15379 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cd44P15379 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cd44P15379 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Cd44P15379 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cd44P15379 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Cd44P15379 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cd44P15379 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cd44P15379 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cd44P15379 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cd44P15379 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cd44P15379 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
Cd44P15379 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cd44P15379 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.94■□□□□ 0.62
Cd44P15379 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cd44P15379 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cd44P15379 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cd44P15379 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cd44P15379 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.94■□□□□ 0.62
Cd44P15379 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cd44P15379 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cd44P15379 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cd44P15379 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cd44P15379 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cd44P15379 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cd44P15379 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cd44P15379 Idnk-204ENSMUST00000226010 1898 ntBASIC18.93■□□□□ 0.62
Cd44P15379 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cd44P15379 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.93■□□□□ 0.62
Cd44P15379 Gm22325-201ENSMUST00000158904 308 ntBASIC18.93■□□□□ 0.62
Cd44P15379 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Cd44P15379 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cd44P15379 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.93■□□□□ 0.62
Cd44P15379 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.93■□□□□ 0.62
Cd44P15379 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cd44P15379 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cd44P15379 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Cd44P15379 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms