Protein–RNA interactions for Protein: P14576

Srp54, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54P14576 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Srp54P14576 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Srp54P14576 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.71■□□□□ 0.43
Srp54P14576 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Srp54P14576 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Srp54P14576 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Srp54P14576 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.71■□□□□ 0.43
Srp54P14576 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.71■□□□□ 0.43
Srp54P14576 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.71■□□□□ 0.43
Srp54P14576 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Srp54P14576 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Srp54P14576 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Srp54P14576 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.71■□□□□ 0.43
Srp54P14576 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Srp54P14576 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Srp54P14576 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Srp54P14576 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Srp54P14576 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Srp54P14576 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Srp54P14576 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Srp54P14576 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Srp54P14576 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Srp54P14576 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Srp54P14576 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Srp54P14576 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Srp54P14576 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Srp54P14576 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.7■□□□□ 0.42
Srp54P14576 Mir6982-201ENSMUST00000184354 68 ntBASIC17.7■□□□□ 0.42
Srp54P14576 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Srp54P14576 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Srp54P14576 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Srp54P14576 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Srp54P14576 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Srp54P14576 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Srp54P14576 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Srp54P14576 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Srp54P14576 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Srp54P14576 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Srp54P14576 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.69■□□□□ 0.42
Srp54P14576 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Srp54P14576 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Srp54P14576 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Srp54P14576 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.69■□□□□ 0.42
Srp54P14576 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Srp54P14576 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.69■□□□□ 0.42
Srp54P14576 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.69■□□□□ 0.42
Srp54P14576 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Srp54P14576 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Srp54P14576 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Srp54P14576 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.69■□□□□ 0.42
Srp54P14576 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Srp54P14576 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Srp54P14576 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Srp54P14576 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Srp54P14576 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Srp54P14576 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Srp54P14576 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Srp54P14576 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Srp54P14576 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Srp54P14576 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Srp54P14576 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.68■□□□□ 0.42
Srp54P14576 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Srp54P14576 Gm38285-201ENSMUST00000192928 922 ntBASIC17.68■□□□□ 0.42
Srp54P14576 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Srp54P14576 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Srp54P14576 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Srp54P14576 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Srp54P14576 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.68■□□□□ 0.42
Srp54P14576 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Srp54P14576 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Srp54P14576 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Srp54P14576 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Srp54P14576 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Srp54P14576 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Srp54P14576 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Srp54P14576 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Srp54P14576 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Srp54P14576 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Srp54P14576 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Srp54P14576 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Srp54P14576 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Srp54P14576 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Srp54P14576 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.67■□□□□ 0.42
Srp54P14576 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Srp54P14576 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.67■□□□□ 0.42
Srp54P14576 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.67■□□□□ 0.42
Srp54P14576 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Srp54P14576 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Srp54P14576 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Srp54P14576 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Srp54P14576 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Srp54P14576 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Srp54P14576 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Srp54P14576 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.66■□□□□ 0.42
Srp54P14576 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.66■□□□□ 0.42
Srp54P14576 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Srp54P14576 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Srp54P14576 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Srp54P14576 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.66■□□□□ 0.42
Srp54P14576 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms