Protein–RNA interactions for Protein: P13705

Msh3, DNA mismatch repair protein Msh3, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3P13705 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Msh3P13705 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.93■□□□□ 0.78
Msh3P13705 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.93■□□□□ 0.78
Msh3P13705 Gm5408-201ENSMUST00000197998 747 ntBASIC19.93■□□□□ 0.78
Msh3P13705 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Msh3P13705 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Msh3P13705 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Msh3P13705 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Msh3P13705 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Msh3P13705 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Msh3P13705 Dio3-201ENSMUST00000097228 1449 ntBASIC19.93■□□□□ 0.78
Msh3P13705 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Msh3P13705 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Msh3P13705 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Msh3P13705 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Msh3P13705 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Msh3P13705 Gm11927-201ENSMUST00000118472 759 ntBASIC19.92■□□□□ 0.78
Msh3P13705 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.92■□□□□ 0.78
Msh3P13705 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.92■□□□□ 0.78
Msh3P13705 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Msh3P13705 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Msh3P13705 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Msh3P13705 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Msh3P13705 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Msh3P13705 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Msh3P13705 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Msh3P13705 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Msh3P13705 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.91■□□□□ 0.78
Msh3P13705 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Msh3P13705 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Msh3P13705 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.91■□□□□ 0.78
Msh3P13705 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Msh3P13705 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.91■□□□□ 0.78
Msh3P13705 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Msh3P13705 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.91■□□□□ 0.78
Msh3P13705 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Msh3P13705 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.91■□□□□ 0.78
Msh3P13705 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Msh3P13705 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Msh3P13705 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Msh3P13705 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Msh3P13705 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Msh3P13705 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.9■□□□□ 0.78
Msh3P13705 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.9■□□□□ 0.78
Msh3P13705 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Msh3P13705 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.9■□□□□ 0.78
Msh3P13705 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Msh3P13705 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Msh3P13705 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Msh3P13705 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Msh3P13705 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
Msh3P13705 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.89■□□□□ 0.77
Msh3P13705 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Msh3P13705 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Msh3P13705 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.89■□□□□ 0.77
Msh3P13705 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Msh3P13705 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Msh3P13705 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Msh3P13705 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Msh3P13705 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.89■□□□□ 0.77
Msh3P13705 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Msh3P13705 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Msh3P13705 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Msh3P13705 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Msh3P13705 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Msh3P13705 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Msh3P13705 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Msh3P13705 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Msh3P13705 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Msh3P13705 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Msh3P13705 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.88■□□□□ 0.77
Msh3P13705 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Msh3P13705 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Msh3P13705 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Msh3P13705 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Msh3P13705 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Msh3P13705 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Msh3P13705 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Msh3P13705 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Msh3P13705 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Msh3P13705 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Msh3P13705 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Msh3P13705 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Msh3P13705 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Msh3P13705 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Msh3P13705 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Msh3P13705 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Msh3P13705 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.87■□□□□ 0.77
Msh3P13705 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.87■□□□□ 0.77
Msh3P13705 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.87■□□□□ 0.77
Msh3P13705 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Msh3P13705 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.87■□□□□ 0.77
Msh3P13705 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Msh3P13705 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Msh3P13705 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Msh3P13705 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Msh3P13705 Idnk-204ENSMUST00000226010 1898 ntBASIC19.86■□□□□ 0.77
Msh3P13705 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Msh3P13705 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Msh3P13705 Mir2861-201ENSMUST00000175539 82 ntBASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms