Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Cntn1P12960 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cntn1P12960 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cntn1P12960 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Cntn1P12960 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cntn1P12960 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.3■□□□□ 0.36
Cntn1P12960 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Cntn1P12960 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.3■□□□□ 0.36
Cntn1P12960 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.3■□□□□ 0.36
Cntn1P12960 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.3■□□□□ 0.36
Cntn1P12960 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.3■□□□□ 0.36
Cntn1P12960 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.3■□□□□ 0.36
Cntn1P12960 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.3■□□□□ 0.36
Cntn1P12960 Gm10252-201ENSMUST00000209541 832 ntBASIC17.3■□□□□ 0.36
Cntn1P12960 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cntn1P12960 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cntn1P12960 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cntn1P12960 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cntn1P12960 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Cntn1P12960 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cntn1P12960 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cntn1P12960 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cntn1P12960 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cntn1P12960 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cntn1P12960 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cntn1P12960 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Cntn1P12960 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cntn1P12960 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.29■□□□□ 0.36
Cntn1P12960 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cntn1P12960 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cntn1P12960 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cntn1P12960 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.29■□□□□ 0.36
Cntn1P12960 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cntn1P12960 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cntn1P12960 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cntn1P12960 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cntn1P12960 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
Cntn1P12960 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cntn1P12960 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cntn1P12960 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cntn1P12960 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cntn1P12960 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.28■□□□□ 0.36
Cntn1P12960 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cntn1P12960 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cntn1P12960 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
Cntn1P12960 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.28■□□□□ 0.36
Cntn1P12960 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.28■□□□□ 0.36
Cntn1P12960 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cntn1P12960 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.28■□□□□ 0.36
Cntn1P12960 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cntn1P12960 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cntn1P12960 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cntn1P12960 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Cntn1P12960 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cntn1P12960 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cntn1P12960 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cntn1P12960 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.27■□□□□ 0.36
Cntn1P12960 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cntn1P12960 Gm38285-201ENSMUST00000192928 922 ntBASIC17.27■□□□□ 0.36
Cntn1P12960 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.27■□□□□ 0.36
Cntn1P12960 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
Cntn1P12960 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.27■□□□□ 0.36
Cntn1P12960 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Cntn1P12960 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cntn1P12960 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cntn1P12960 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cntn1P12960 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cntn1P12960 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cntn1P12960 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cntn1P12960 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cntn1P12960 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cntn1P12960 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cntn1P12960 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cntn1P12960 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cntn1P12960 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cntn1P12960 Gm15378-201ENSMUST00000121894 207 ntBASIC17.26■□□□□ 0.35
Cntn1P12960 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.26■□□□□ 0.35
Cntn1P12960 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Cntn1P12960 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cntn1P12960 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cntn1P12960 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cntn1P12960 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cntn1P12960 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cntn1P12960 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cntn1P12960 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cntn1P12960 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Cntn1P12960 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cntn1P12960 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.25■□□□□ 0.35
Cntn1P12960 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cntn1P12960 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Cntn1P12960 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Cntn1P12960 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.25■□□□□ 0.35
Cntn1P12960 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cntn1P12960 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Cntn1P12960 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.25■□□□□ 0.35
Cntn1P12960 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cntn1P12960 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cntn1P12960 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cntn1P12960 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cntn1P12960 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms