Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rc3h2P0C090 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rc3h2P0C090 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rc3h2P0C090 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Rc3h2P0C090 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.36■□□□□ 0.53
Rc3h2P0C090 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rc3h2P0C090 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rc3h2P0C090 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Rc3h2P0C090 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rc3h2P0C090 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rc3h2P0C090 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rc3h2P0C090 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rc3h2P0C090 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rc3h2P0C090 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rc3h2P0C090 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rc3h2P0C090 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Rc3h2P0C090 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rc3h2P0C090 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.35■□□□□ 0.53
Rc3h2P0C090 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.35■□□□□ 0.53
Rc3h2P0C090 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rc3h2P0C090 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rc3h2P0C090 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.35■□□□□ 0.53
Rc3h2P0C090 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.35■□□□□ 0.53
Rc3h2P0C090 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rc3h2P0C090 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rc3h2P0C090 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rc3h2P0C090 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rc3h2P0C090 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rc3h2P0C090 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rc3h2P0C090 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rc3h2P0C090 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rc3h2P0C090 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rc3h2P0C090 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rc3h2P0C090 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rc3h2P0C090 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Rc3h2P0C090 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rc3h2P0C090 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rc3h2P0C090 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.34■□□□□ 0.53
Rc3h2P0C090 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.34■□□□□ 0.53
Rc3h2P0C090 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rc3h2P0C090 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rc3h2P0C090 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rc3h2P0C090 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Rc3h2P0C090 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Rc3h2P0C090 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Rc3h2P0C090 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rc3h2P0C090 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rc3h2P0C090 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rc3h2P0C090 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rc3h2P0C090 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.34■□□□□ 0.53
Rc3h2P0C090 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rc3h2P0C090 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Rc3h2P0C090 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rc3h2P0C090 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Rc3h2P0C090 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rc3h2P0C090 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Rc3h2P0C090 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.33■□□□□ 0.53
Rc3h2P0C090 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rc3h2P0C090 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rc3h2P0C090 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rc3h2P0C090 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.33■□□□□ 0.52
Rc3h2P0C090 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rc3h2P0C090 Gm13836-201ENSMUST00000121159 501 ntBASIC18.33■□□□□ 0.52
Rc3h2P0C090 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rc3h2P0C090 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
Rc3h2P0C090 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.33■□□□□ 0.52
Rc3h2P0C090 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.33■□□□□ 0.52
Rc3h2P0C090 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.33■□□□□ 0.52
Rc3h2P0C090 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rc3h2P0C090 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rc3h2P0C090 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rc3h2P0C090 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Rc3h2P0C090 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rc3h2P0C090 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
Rc3h2P0C090 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.52
Rc3h2P0C090 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rc3h2P0C090 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rc3h2P0C090 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rc3h2P0C090 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.32■□□□□ 0.52
Rc3h2P0C090 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rc3h2P0C090 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rc3h2P0C090 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rc3h2P0C090 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.32■□□□□ 0.52
Rc3h2P0C090 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rc3h2P0C090 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rc3h2P0C090 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rc3h2P0C090 Gm5417-201ENSMUST00000079706 384 ntBASIC18.32■□□□□ 0.52
Rc3h2P0C090 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rc3h2P0C090 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rc3h2P0C090 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rc3h2P0C090 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rc3h2P0C090 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rc3h2P0C090 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rc3h2P0C090 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.31■□□□□ 0.52
Rc3h2P0C090 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rc3h2P0C090 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
Rc3h2P0C090 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.31■□□□□ 0.52
Rc3h2P0C090 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.31■□□□□ 0.52
Rc3h2P0C090 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rc3h2P0C090 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms