Protein–RNA interactions for Protein: P09084

Pax1, Paired box protein Pax-1, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pax1P09084 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pax1P09084 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC14.65□□□□□ -0.06
Pax1P09084 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pax1P09084 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pax1P09084 Gm8309-201ENSMUST00000206627 1448 ntBASIC14.65□□□□□ -0.06
Pax1P09084 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Pax1P09084 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Pax1P09084 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Pax1P09084 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pax1P09084 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pax1P09084 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pax1P09084 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pax1P09084 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Pax1P09084 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pax1P09084 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pax1P09084 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pax1P09084 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pax1P09084 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
Pax1P09084 Gm12821-201ENSMUST00000120022 600 ntBASIC14.64□□□□□ -0.07
Pax1P09084 Appbp2os-202ENSMUST00000206972 447 ntBASIC14.64□□□□□ -0.07
Pax1P09084 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Pax1P09084 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pax1P09084 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pax1P09084 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pax1P09084 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pax1P09084 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pax1P09084 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pax1P09084 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pax1P09084 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC14.64□□□□□ -0.07
Pax1P09084 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC14.63□□□□□ -0.07
Pax1P09084 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pax1P09084 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pax1P09084 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pax1P09084 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pax1P09084 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pax1P09084 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pax1P09084 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Pax1P09084 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Pax1P09084 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Pax1P09084 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pax1P09084 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pax1P09084 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
Pax1P09084 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pax1P09084 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC14.63□□□□□ -0.07
Pax1P09084 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pax1P09084 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pax1P09084 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
Pax1P09084 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pax1P09084 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pax1P09084 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Pax1P09084 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pax1P09084 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pax1P09084 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pax1P09084 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pax1P09084 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pax1P09084 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pax1P09084 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.62□□□□□ -0.07
Pax1P09084 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pax1P09084 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pax1P09084 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.62□□□□□ -0.07
Pax1P09084 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pax1P09084 Gm26971-201ENSMUST00000182423 1072 ntBASIC14.62□□□□□ -0.07
Pax1P09084 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pax1P09084 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.62□□□□□ -0.07
Pax1P09084 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC14.62□□□□□ -0.07
Pax1P09084 Gm45417-201ENSMUST00000209533 758 ntBASIC14.62□□□□□ -0.07
Pax1P09084 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pax1P09084 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pax1P09084 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pax1P09084 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pax1P09084 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pax1P09084 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pax1P09084 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pax1P09084 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC14.61□□□□□ -0.07
Pax1P09084 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pax1P09084 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pax1P09084 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pax1P09084 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pax1P09084 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pax1P09084 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Pax1P09084 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pax1P09084 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pax1P09084 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pax1P09084 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pax1P09084 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pax1P09084 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pax1P09084 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pax1P09084 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Pax1P09084 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pax1P09084 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pax1P09084 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pax1P09084 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pax1P09084 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.6□□□□□ -0.07
Pax1P09084 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pax1P09084 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pax1P09084 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.6□□□□□ -0.07
Pax1P09084 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pax1P09084 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pax1P09084 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.6□□□□□ -0.07
Pax1P09084 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms