Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Cd74P04441 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC15.15■□□□□ 0.02
Cd74P04441 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cd74P04441 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Cd74P04441 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC15.15■□□□□ 0.02
Cd74P04441 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cd74P04441 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cd74P04441 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cd74P04441 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cd74P04441 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Cd74P04441 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cd74P04441 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cd74P04441 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cd74P04441 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
Cd74P04441 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cd74P04441 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cd74P04441 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd74P04441 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cd74P04441 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cd74P04441 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.14■□□□□ 0.01
Cd74P04441 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cd74P04441 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC15.14■□□□□ 0.01
Cd74P04441 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd74P04441 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd74P04441 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd74P04441 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd74P04441 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Cd74P04441 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd74P04441 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC15.14■□□□□ 0.01
Cd74P04441 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd74P04441 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd74P04441 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd74P04441 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd74P04441 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd74P04441 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd74P04441 Gm37352-201ENSMUST00000193908 2181 ntBASIC15.14■□□□□ 0.01
Cd74P04441 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd74P04441 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd74P04441 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC15.13■□□□□ 0.01
Cd74P04441 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Cd74P04441 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cd74P04441 Dmtn-210ENSMUST00000228824 2377 ntBASIC15.13■□□□□ 0.01
Cd74P04441 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cd74P04441 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cd74P04441 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cd74P04441 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC15.13■□□□□ 0.01
Cd74P04441 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cd74P04441 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Cd74P04441 Gm6211-202ENSMUST00000167849 925 ntBASIC15.13■□□□□ 0.01
Cd74P04441 AC124603.1-201ENSMUST00000223843 308 ntBASIC15.13■□□□□ 0.01
Cd74P04441 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cd74P04441 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Cd74P04441 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cd74P04441 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cd74P04441 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cd74P04441 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cd74P04441 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cd74P04441 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cd74P04441 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cd74P04441 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cd74P04441 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cd74P04441 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cd74P04441 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cd74P04441 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cd74P04441 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cd74P04441 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.12■□□□□ 0.01
Cd74P04441 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cd74P04441 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cd74P04441 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Cd74P04441 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cd74P04441 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC15.12■□□□□ 0.01
Cd74P04441 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cd74P04441 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cd74P04441 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cd74P04441 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cd74P04441 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cd74P04441 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC15.12■□□□□ 0.01
Cd74P04441 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Cd74P04441 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Cd74P04441 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cd74P04441 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC15.12■□□□□ 0.01
Cd74P04441 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cd74P04441 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cd74P04441 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cd74P04441 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cd74P04441 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cd74P04441 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cd74P04441 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cd74P04441 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cd74P04441 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cd74P04441 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cd74P04441 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Cd74P04441 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cd74P04441 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cd74P04441 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cd74P04441 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cd74P04441 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cd74P04441 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cd74P04441 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cd74P04441 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms