Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hoxa3P02831 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hoxa3P02831 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hoxa3P02831 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.12■□□□□ 0.01
Hoxa3P02831 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Hoxa3P02831 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hoxa3P02831 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC15.12■□□□□ 0.01
Hoxa3P02831 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hoxa3P02831 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hoxa3P02831 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Hoxa3P02831 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hoxa3P02831 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hoxa3P02831 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hoxa3P02831 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Hoxa3P02831 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Hoxa3P02831 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hoxa3P02831 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC15.11■□□□□ 0.01
Hoxa3P02831 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hoxa3P02831 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Hoxa3P02831 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hoxa3P02831 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hoxa3P02831 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hoxa3P02831 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.11■□□□□ 0.01
Hoxa3P02831 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hoxa3P02831 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Hoxa3P02831 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Hoxa3P02831 Gm10812-201ENSMUST00000099864 546 ntBASIC15.11■□□□□ 0.01
Hoxa3P02831 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC15.11■□□□□ 0.01
Hoxa3P02831 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.11■□□□□ 0.01
Hoxa3P02831 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hoxa3P02831 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Hoxa3P02831 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hoxa3P02831 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Hoxa3P02831 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hoxa3P02831 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hoxa3P02831 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC15.11■□□□□ 0.01
Hoxa3P02831 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hoxa3P02831 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hoxa3P02831 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hoxa3P02831 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hoxa3P02831 Gm43182-201ENSMUST00000199476 2528 ntBASIC15.1■□□□□ 0.01
Hoxa3P02831 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hoxa3P02831 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Hoxa3P02831 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hoxa3P02831 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hoxa3P02831 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Hoxa3P02831 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hoxa3P02831 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Hoxa3P02831 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Hoxa3P02831 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hoxa3P02831 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Hoxa3P02831 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.09■□□□□ 0.01
Hoxa3P02831 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hoxa3P02831 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hoxa3P02831 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hoxa3P02831 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hoxa3P02831 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hoxa3P02831 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hoxa3P02831 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hoxa3P02831 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Hoxa3P02831 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC15.09■□□□□ 0.01
Hoxa3P02831 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hoxa3P02831 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hoxa3P02831 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hoxa3P02831 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hoxa3P02831 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC15.09■□□□□ 0.01
Hoxa3P02831 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Hoxa3P02831 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hoxa3P02831 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Hoxa3P02831 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Hoxa3P02831 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Hoxa3P02831 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Hoxa3P02831 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hoxa3P02831 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hoxa3P02831 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
Hoxa3P02831 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.08■□□□□ 0
Hoxa3P02831 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC15.08■□□□□ 0
Hoxa3P02831 Gm13181-201ENSMUST00000120117 1069 ntBASIC15.08■□□□□ 0
Hoxa3P02831 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC15.08■□□□□ 0
Hoxa3P02831 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Hoxa3P02831 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hoxa3P02831 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hoxa3P02831 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Hoxa3P02831 Gm21596-201ENSMUST00000178049 1316 ntBASIC15.08■□□□□ 0
Hoxa3P02831 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hoxa3P02831 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC15.08■□□□□ 0
Hoxa3P02831 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Hoxa3P02831 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Hoxa3P02831 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hoxa3P02831 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hoxa3P02831 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hoxa3P02831 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.07■□□□□ 0
Hoxa3P02831 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Hoxa3P02831 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hoxa3P02831 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hoxa3P02831 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC15.07■□□□□ 0
Hoxa3P02831 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC15.07■□□□□ 0
Hoxa3P02831 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hoxa3P02831 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hoxa3P02831 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms