Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TcraP01849 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TcraP01849 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TcraP01849 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
TcraP01849 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TcraP01849 Gm7292-201ENSMUST00000194706 2527 ntBASIC13.21□□□□□ -0.29
TcraP01849 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TcraP01849 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TcraP01849 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC13.21□□□□□ -0.3
TcraP01849 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
TcraP01849 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
TcraP01849 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
TcraP01849 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
TcraP01849 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TcraP01849 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TcraP01849 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
TcraP01849 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TcraP01849 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC13.2□□□□□ -0.3
TcraP01849 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TcraP01849 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TcraP01849 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TcraP01849 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TcraP01849 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TcraP01849 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TcraP01849 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
TcraP01849 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
TcraP01849 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC13.2□□□□□ -0.3
TcraP01849 Gm8770-201ENSMUST00000121113 1109 ntBASIC13.2□□□□□ -0.3
TcraP01849 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TcraP01849 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TcraP01849 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TcraP01849 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TcraP01849 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TcraP01849 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TcraP01849 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TcraP01849 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TcraP01849 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TcraP01849 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TcraP01849 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC13.19□□□□□ -0.3
TcraP01849 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TcraP01849 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TcraP01849 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TcraP01849 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
TcraP01849 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
TcraP01849 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TcraP01849 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TcraP01849 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TcraP01849 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TcraP01849 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TcraP01849 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TcraP01849 Gm6085-201ENSMUST00000182774 1470 ntBASIC13.18□□□□□ -0.3
TcraP01849 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
TcraP01849 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TcraP01849 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TcraP01849 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TcraP01849 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TcraP01849 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC13.18□□□□□ -0.3
TcraP01849 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TcraP01849 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TcraP01849 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TcraP01849 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TcraP01849 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TcraP01849 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TcraP01849 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TcraP01849 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC13.18□□□□□ -0.3
TcraP01849 Gm45244-201ENSMUST00000211328 2200 ntBASIC13.18□□□□□ -0.3
TcraP01849 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TcraP01849 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TcraP01849 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TcraP01849 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TcraP01849 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
TcraP01849 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TcraP01849 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TcraP01849 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TcraP01849 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TcraP01849 Gm42911-201ENSMUST00000199360 1630 ntBASIC13.17□□□□□ -0.3
TcraP01849 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TcraP01849 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TcraP01849 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TcraP01849 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TcraP01849 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TcraP01849 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC13.17□□□□□ -0.3
TcraP01849 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TcraP01849 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TcraP01849 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TcraP01849 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.17□□□□□ -0.3
TcraP01849 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TcraP01849 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TcraP01849 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TcraP01849 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TcraP01849 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TcraP01849 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TcraP01849 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TcraP01849 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TcraP01849 Gm27045-201ENSMUST00000182145 1402 ntBASIC13.16□□□□□ -0.3
TcraP01849 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TcraP01849 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC13.16□□□□□ -0.3
TcraP01849 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
TcraP01849 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TcraP01849 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms