Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Best1O88870 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.38■□□□□ 0.37
Best1O88870 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.38■□□□□ 0.37
Best1O88870 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Best1O88870 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Best1O88870 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Best1O88870 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Best1O88870 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Best1O88870 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Best1O88870 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Best1O88870 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Best1O88870 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.38■□□□□ 0.37
Best1O88870 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.38■□□□□ 0.37
Best1O88870 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Best1O88870 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Best1O88870 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Best1O88870 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Best1O88870 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Best1O88870 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.37■□□□□ 0.37
Best1O88870 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Best1O88870 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Best1O88870 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.37■□□□□ 0.37
Best1O88870 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Best1O88870 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Best1O88870 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Best1O88870 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Best1O88870 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Best1O88870 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.36■□□□□ 0.37
Best1O88870 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Best1O88870 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Best1O88870 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Best1O88870 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Best1O88870 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Best1O88870 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Best1O88870 Mir5122-201ENSMUST00000175004 89 ntBASIC17.36■□□□□ 0.37
Best1O88870 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.36■□□□□ 0.37
Best1O88870 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Best1O88870 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Best1O88870 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Best1O88870 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Best1O88870 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Best1O88870 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.36■□□□□ 0.37
Best1O88870 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Best1O88870 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Best1O88870 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Best1O88870 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Best1O88870 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Best1O88870 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Best1O88870 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Best1O88870 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Best1O88870 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Best1O88870 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Best1O88870 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.35■□□□□ 0.37
Best1O88870 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Best1O88870 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Best1O88870 Mir6982-201ENSMUST00000184354 68 ntBASIC17.35■□□□□ 0.37
Best1O88870 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.35■□□□□ 0.37
Best1O88870 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Best1O88870 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Best1O88870 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Best1O88870 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Best1O88870 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.35■□□□□ 0.37
Best1O88870 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Best1O88870 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Best1O88870 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Best1O88870 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Best1O88870 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Best1O88870 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Best1O88870 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.34■□□□□ 0.37
Best1O88870 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.34■□□□□ 0.37
Best1O88870 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.34■□□□□ 0.37
Best1O88870 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Best1O88870 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Best1O88870 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Best1O88870 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Best1O88870 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Best1O88870 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Best1O88870 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Best1O88870 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Best1O88870 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Best1O88870 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Best1O88870 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Best1O88870 Gm37055-201ENSMUST00000191866 133 ntBASIC17.33■□□□□ 0.36
Best1O88870 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.33■□□□□ 0.36
Best1O88870 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Best1O88870 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Best1O88870 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.33■□□□□ 0.36
Best1O88870 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Best1O88870 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.36
Best1O88870 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Best1O88870 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Best1O88870 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Best1O88870 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Best1O88870 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Best1O88870 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Best1O88870 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Best1O88870 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Best1O88870 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Best1O88870 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Best1O88870 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms