Protein–RNA interactions for Protein: O88597

Becn1, Beclin-1, mousemouse

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Becn1O88597 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Becn1O88597 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Becn1O88597 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Becn1O88597 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Becn1O88597 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Becn1O88597 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Becn1O88597 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Becn1O88597 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Becn1O88597 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Becn1O88597 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC20.67■□□□□ 0.9
Becn1O88597 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC20.67■□□□□ 0.9
Becn1O88597 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Becn1O88597 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.67■□□□□ 0.9
Becn1O88597 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Becn1O88597 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Becn1O88597 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Becn1O88597 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Becn1O88597 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Becn1O88597 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Becn1O88597 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
Becn1O88597 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Becn1O88597 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Becn1O88597 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
Becn1O88597 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
Becn1O88597 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Becn1O88597 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Becn1O88597 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Becn1O88597 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Becn1O88597 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Becn1O88597 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Becn1O88597 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Becn1O88597 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Becn1O88597 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Becn1O88597 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Becn1O88597 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Becn1O88597 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Becn1O88597 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Becn1O88597 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Becn1O88597 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Becn1O88597 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.64■□□□□ 0.89
Becn1O88597 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Becn1O88597 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Becn1O88597 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Becn1O88597 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Becn1O88597 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.64■□□□□ 0.89
Becn1O88597 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Becn1O88597 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Becn1O88597 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Becn1O88597 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Becn1O88597 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Becn1O88597 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Becn1O88597 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Becn1O88597 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Becn1O88597 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Becn1O88597 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Becn1O88597 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Becn1O88597 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Becn1O88597 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Becn1O88597 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Becn1O88597 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Becn1O88597 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Becn1O88597 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Becn1O88597 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.63■□□□□ 0.89
Becn1O88597 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Becn1O88597 Mir7075-201ENSMUST00000184187 82 ntBASIC20.63■□□□□ 0.89
Becn1O88597 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.63■□□□□ 0.89
Becn1O88597 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.63■□□□□ 0.89
Becn1O88597 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Becn1O88597 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Becn1O88597 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Becn1O88597 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Becn1O88597 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Becn1O88597 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Becn1O88597 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Becn1O88597 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC20.63■□□□□ 0.89
Becn1O88597 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Becn1O88597 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Becn1O88597 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Becn1O88597 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Becn1O88597 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Becn1O88597 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Becn1O88597 Gm43338-201ENSMUST00000198617 2223 ntBASIC20.62■□□□□ 0.89
Becn1O88597 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Becn1O88597 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Becn1O88597 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Becn1O88597 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Becn1O88597 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Becn1O88597 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Becn1O88597 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Becn1O88597 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Becn1O88597 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Becn1O88597 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Becn1O88597 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC20.61■□□□□ 0.89
Becn1O88597 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Becn1O88597 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Becn1O88597 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Becn1O88597 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Becn1O88597 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Becn1O88597 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Becn1O88597 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms