Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tnfrsf17O88472 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.8■□□□□ 0.28
Tnfrsf17O88472 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfrsf17O88472 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfrsf17O88472 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfrsf17O88472 Gm9013-201ENSMUST00000132939 882 ntBASIC16.79■□□□□ 0.28
Tnfrsf17O88472 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfrsf17O88472 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Tnfrsf17O88472 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.79■□□□□ 0.28
Tnfrsf17O88472 Gm21559-201ENSMUST00000220638 855 ntBASIC16.79■□□□□ 0.28
Tnfrsf17O88472 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfrsf17O88472 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfrsf17O88472 Gm8587-201ENSMUST00000076538 843 ntBASIC16.79■□□□□ 0.28
Tnfrsf17O88472 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfrsf17O88472 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfrsf17O88472 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC16.79■□□□□ 0.28
Tnfrsf17O88472 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.79■□□□□ 0.28
Tnfrsf17O88472 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfrsf17O88472 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfrsf17O88472 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfrsf17O88472 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfrsf17O88472 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfrsf17O88472 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tnfrsf17O88472 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Tnfrsf17O88472 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tnfrsf17O88472 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tnfrsf17O88472 Gm24589-201ENSMUST00000116692 94 ntBASIC16.78■□□□□ 0.28
Tnfrsf17O88472 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tnfrsf17O88472 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.78■□□□□ 0.28
Tnfrsf17O88472 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.78■□□□□ 0.28
Tnfrsf17O88472 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.78■□□□□ 0.28
Tnfrsf17O88472 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tnfrsf17O88472 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Tnfrsf17O88472 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tnfrsf17O88472 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tnfrsf17O88472 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tnfrsf17O88472 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tnfrsf17O88472 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tnfrsf17O88472 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tnfrsf17O88472 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tnfrsf17O88472 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tnfrsf17O88472 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Tnfrsf17O88472 Gm17808-201ENSMUST00000200859 894 ntBASIC16.77■□□□□ 0.28
Tnfrsf17O88472 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.77■□□□□ 0.28
Tnfrsf17O88472 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tnfrsf17O88472 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tnfrsf17O88472 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Tnfrsf17O88472 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tnfrsf17O88472 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tnfrsf17O88472 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.76■□□□□ 0.27
Tnfrsf17O88472 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf17O88472 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf17O88472 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf17O88472 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf17O88472 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.76■□□□□ 0.27
Tnfrsf17O88472 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.76■□□□□ 0.27
Tnfrsf17O88472 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Tnfrsf17O88472 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Tnfrsf17O88472 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf17O88472 Gm27389-201ENSMUST00000183622 195 ntBASIC16.76■□□□□ 0.27
Tnfrsf17O88472 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.76■□□□□ 0.27
Tnfrsf17O88472 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf17O88472 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf17O88472 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf17O88472 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf17O88472 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tnfrsf17O88472 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tnfrsf17O88472 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Tnfrsf17O88472 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tnfrsf17O88472 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
Tnfrsf17O88472 Gm18115-201ENSMUST00000221209 621 ntBASIC16.75■□□□□ 0.27
Tnfrsf17O88472 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tnfrsf17O88472 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tnfrsf17O88472 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tnfrsf17O88472 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tnfrsf17O88472 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.74■□□□□ 0.27
Tnfrsf17O88472 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tnfrsf17O88472 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tnfrsf17O88472 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tnfrsf17O88472 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Tnfrsf17O88472 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tnfrsf17O88472 AW822252-206ENSMUST00000208904 237 ntBASIC16.74■□□□□ 0.27
Tnfrsf17O88472 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.74■□□□□ 0.27
Tnfrsf17O88472 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tnfrsf17O88472 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tnfrsf17O88472 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Tnfrsf17O88472 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tnfrsf17O88472 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.74■□□□□ 0.27
Tnfrsf17O88472 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tnfrsf17O88472 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tnfrsf17O88472 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tnfrsf17O88472 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.74■□□□□ 0.27
Tnfrsf17O88472 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tnfrsf17O88472 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Tnfrsf17O88472 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tnfrsf17O88472 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tnfrsf17O88472 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.73■□□□□ 0.27
Tnfrsf17O88472 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Tnfrsf17O88472 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tnfrsf17O88472 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms