Protein–RNA interactions for Protein: O88351

Ikbkb, Inhibitor of nuclear factor kappa-B kinase subunit beta, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IkbkbO88351 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.96■□□□□ 0.79
IkbkbO88351 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
IkbkbO88351 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.96■□□□□ 0.79
IkbkbO88351 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
IkbkbO88351 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
IkbkbO88351 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
IkbkbO88351 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
IkbkbO88351 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
IkbkbO88351 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
IkbkbO88351 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
IkbkbO88351 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
IkbkbO88351 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
IkbkbO88351 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
IkbkbO88351 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
IkbkbO88351 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
IkbkbO88351 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
IkbkbO88351 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.95■□□□□ 0.78
IkbkbO88351 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.95■□□□□ 0.78
IkbkbO88351 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
IkbkbO88351 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
IkbkbO88351 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.95■□□□□ 0.78
IkbkbO88351 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
IkbkbO88351 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.95■□□□□ 0.78
IkbkbO88351 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
IkbkbO88351 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
IkbkbO88351 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
IkbkbO88351 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
IkbkbO88351 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
IkbkbO88351 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
IkbkbO88351 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
IkbkbO88351 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
IkbkbO88351 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
IkbkbO88351 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.94■□□□□ 0.78
IkbkbO88351 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
IkbkbO88351 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
IkbkbO88351 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
IkbkbO88351 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.94■□□□□ 0.78
IkbkbO88351 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
IkbkbO88351 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
IkbkbO88351 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
IkbkbO88351 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
IkbkbO88351 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
IkbkbO88351 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
IkbkbO88351 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
IkbkbO88351 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
IkbkbO88351 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
IkbkbO88351 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
IkbkbO88351 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
IkbkbO88351 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
IkbkbO88351 Gm20760-201ENSMUST00000179197 648 ntBASIC19.93■□□□□ 0.78
IkbkbO88351 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
IkbkbO88351 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
IkbkbO88351 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
IkbkbO88351 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
IkbkbO88351 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
IkbkbO88351 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
IkbkbO88351 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
IkbkbO88351 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
IkbkbO88351 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
IkbkbO88351 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
IkbkbO88351 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
IkbkbO88351 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
IkbkbO88351 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.92■□□□□ 0.78
IkbkbO88351 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
IkbkbO88351 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
IkbkbO88351 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
IkbkbO88351 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
IkbkbO88351 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.92■□□□□ 0.78
IkbkbO88351 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
IkbkbO88351 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.92■□□□□ 0.78
IkbkbO88351 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
IkbkbO88351 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
IkbkbO88351 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
IkbkbO88351 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
IkbkbO88351 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
IkbkbO88351 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
IkbkbO88351 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
IkbkbO88351 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
IkbkbO88351 Gm37856-201ENSMUST00000191634 999 ntBASIC19.91■□□□□ 0.78
IkbkbO88351 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.91■□□□□ 0.78
IkbkbO88351 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
IkbkbO88351 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
IkbkbO88351 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.91■□□□□ 0.78
IkbkbO88351 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
IkbkbO88351 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
IkbkbO88351 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
IkbkbO88351 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
IkbkbO88351 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
IkbkbO88351 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
IkbkbO88351 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
IkbkbO88351 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.9■□□□□ 0.78
IkbkbO88351 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
IkbkbO88351 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
IkbkbO88351 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
IkbkbO88351 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
IkbkbO88351 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.9■□□□□ 0.78
IkbkbO88351 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
IkbkbO88351 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
IkbkbO88351 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
IkbkbO88351 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms