Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.11■□□□□ 0.33
Rdh5O55240 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rdh5O55240 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rdh5O55240 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rdh5O55240 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.11■□□□□ 0.33
Rdh5O55240 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.11■□□□□ 0.33
Rdh5O55240 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.11■□□□□ 0.33
Rdh5O55240 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rdh5O55240 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rdh5O55240 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rdh5O55240 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rdh5O55240 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Rdh5O55240 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rdh5O55240 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rdh5O55240 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Rdh5O55240 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rdh5O55240 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rdh5O55240 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rdh5O55240 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rdh5O55240 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Rdh5O55240 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rdh5O55240 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rdh5O55240 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Rdh5O55240 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rdh5O55240 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rdh5O55240 Tgds-204ENSMUST00000228543 1594 ntBASIC17.1■□□□□ 0.33
Rdh5O55240 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rdh5O55240 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rdh5O55240 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rdh5O55240 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rdh5O55240 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rdh5O55240 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.09■□□□□ 0.33
Rdh5O55240 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rdh5O55240 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rdh5O55240 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rdh5O55240 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rdh5O55240 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Rdh5O55240 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Rdh5O55240 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rdh5O55240 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rdh5O55240 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rdh5O55240 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
Rdh5O55240 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rdh5O55240 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rdh5O55240 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rdh5O55240 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rdh5O55240 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rdh5O55240 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rdh5O55240 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Rdh5O55240 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rdh5O55240 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
Rdh5O55240 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rdh5O55240 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rdh5O55240 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rdh5O55240 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rdh5O55240 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rdh5O55240 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.08■□□□□ 0.32
Rdh5O55240 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rdh5O55240 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Rdh5O55240 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rdh5O55240 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.08■□□□□ 0.32
Rdh5O55240 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.08■□□□□ 0.32
Rdh5O55240 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.08■□□□□ 0.32
Rdh5O55240 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.08■□□□□ 0.32
Rdh5O55240 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Rdh5O55240 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rdh5O55240 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Rdh5O55240 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rdh5O55240 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rdh5O55240 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rdh5O55240 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.08■□□□□ 0.32
Rdh5O55240 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rdh5O55240 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rdh5O55240 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Rdh5O55240 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.07■□□□□ 0.32
Rdh5O55240 Gm13148-201ENSMUST00000118892 745 ntBASIC17.07■□□□□ 0.32
Rdh5O55240 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rdh5O55240 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Rdh5O55240 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Rdh5O55240 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rdh5O55240 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Rdh5O55240 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rdh5O55240 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rdh5O55240 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.07■□□□□ 0.32
Rdh5O55240 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rdh5O55240 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rdh5O55240 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rdh5O55240 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rdh5O55240 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Rdh5O55240 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rdh5O55240 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rdh5O55240 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rdh5O55240 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Rdh5O55240 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Rdh5O55240 Gm12441-201ENSMUST00000121806 588 ntBASIC17.06■□□□□ 0.32
Rdh5O55240 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rdh5O55240 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Rdh5O55240 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rdh5O55240 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.06■□□□□ 0.32
Rdh5O55240 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms