Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trdmt1O55055 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Trdmt1O55055 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trdmt1O55055 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.97■□□□□ 0.79
Trdmt1O55055 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trdmt1O55055 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trdmt1O55055 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
Trdmt1O55055 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trdmt1O55055 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trdmt1O55055 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trdmt1O55055 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trdmt1O55055 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trdmt1O55055 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trdmt1O55055 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC19.96■□□□□ 0.79
Trdmt1O55055 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trdmt1O55055 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
Trdmt1O55055 Gm21362-201ENSMUST00000194272 928 ntBASIC19.96■□□□□ 0.79
Trdmt1O55055 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trdmt1O55055 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.96■□□□□ 0.79
Trdmt1O55055 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trdmt1O55055 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trdmt1O55055 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trdmt1O55055 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trdmt1O55055 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trdmt1O55055 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trdmt1O55055 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trdmt1O55055 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trdmt1O55055 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trdmt1O55055 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.95■□□□□ 0.78
Trdmt1O55055 Gm27463-201ENSMUST00000183569 57 ntBASIC19.95■□□□□ 0.78
Trdmt1O55055 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trdmt1O55055 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.95■□□□□ 0.78
Trdmt1O55055 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trdmt1O55055 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Trdmt1O55055 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trdmt1O55055 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trdmt1O55055 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.94■□□□□ 0.78
Trdmt1O55055 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trdmt1O55055 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trdmt1O55055 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trdmt1O55055 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trdmt1O55055 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC19.94■□□□□ 0.78
Trdmt1O55055 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.94■□□□□ 0.78
Trdmt1O55055 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.94■□□□□ 0.78
Trdmt1O55055 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.94■□□□□ 0.78
Trdmt1O55055 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trdmt1O55055 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trdmt1O55055 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Trdmt1O55055 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.93■□□□□ 0.78
Trdmt1O55055 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.93■□□□□ 0.78
Trdmt1O55055 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
Trdmt1O55055 Gm38027-201ENSMUST00000192315 235 ntBASIC19.93■□□□□ 0.78
Trdmt1O55055 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trdmt1O55055 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trdmt1O55055 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trdmt1O55055 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Trdmt1O55055 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.93■□□□□ 0.78
Trdmt1O55055 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trdmt1O55055 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trdmt1O55055 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.92■□□□□ 0.78
Trdmt1O55055 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trdmt1O55055 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Trdmt1O55055 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trdmt1O55055 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Trdmt1O55055 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trdmt1O55055 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Trdmt1O55055 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC19.92■□□□□ 0.78
Trdmt1O55055 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trdmt1O55055 Gm45058-201ENSMUST00000205810 766 ntBASIC19.92■□□□□ 0.78
Trdmt1O55055 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trdmt1O55055 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.92■□□□□ 0.78
Trdmt1O55055 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trdmt1O55055 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trdmt1O55055 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trdmt1O55055 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Trdmt1O55055 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trdmt1O55055 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trdmt1O55055 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Trdmt1O55055 Gm43353-201ENSMUST00000199224 1295 ntBASIC19.91■□□□□ 0.78
Trdmt1O55055 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trdmt1O55055 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trdmt1O55055 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trdmt1O55055 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Trdmt1O55055 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Trdmt1O55055 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trdmt1O55055 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trdmt1O55055 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.91■□□□□ 0.78
Trdmt1O55055 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trdmt1O55055 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.9■□□□□ 0.78
Trdmt1O55055 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trdmt1O55055 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trdmt1O55055 Gm18032-201ENSMUST00000222541 538 ntBASIC19.9■□□□□ 0.78
Trdmt1O55055 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trdmt1O55055 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trdmt1O55055 Gm10819-201ENSMUST00000099988 561 ntBASIC19.9■□□□□ 0.78
Trdmt1O55055 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trdmt1O55055 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trdmt1O55055 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trdmt1O55055 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trdmt1O55055 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms