Protein–RNA interactions for Protein: O55029

Copb2, Coatomer subunit beta', mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb2O55029 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Copb2O55029 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Copb2O55029 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Copb2O55029 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Copb2O55029 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Copb2O55029 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Copb2O55029 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Copb2O55029 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Copb2O55029 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Copb2O55029 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Copb2O55029 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Copb2O55029 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Copb2O55029 Gm15565-201ENSMUST00000118890 427 ntBASIC20.74■□□□□ 0.91
Copb2O55029 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC20.74■□□□□ 0.91
Copb2O55029 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Copb2O55029 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Copb2O55029 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.74■□□□□ 0.91
Copb2O55029 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.74■□□□□ 0.91
Copb2O55029 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Copb2O55029 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Copb2O55029 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Copb2O55029 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Copb2O55029 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Copb2O55029 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Copb2O55029 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Copb2O55029 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Copb2O55029 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Copb2O55029 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC20.73■□□□□ 0.91
Copb2O55029 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.73■□□□□ 0.91
Copb2O55029 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC20.73■□□□□ 0.91
Copb2O55029 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Copb2O55029 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Copb2O55029 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Copb2O55029 Gm38345-201ENSMUST00000192635 1748 ntBASIC20.73■□□□□ 0.91
Copb2O55029 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Copb2O55029 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
Copb2O55029 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC20.72■□□□□ 0.91
Copb2O55029 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.72■□□□□ 0.91
Copb2O55029 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Copb2O55029 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Copb2O55029 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Copb2O55029 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Copb2O55029 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Copb2O55029 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.71■□□□□ 0.91
Copb2O55029 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Copb2O55029 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Copb2O55029 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.71■□□□□ 0.91
Copb2O55029 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC20.71■□□□□ 0.91
Copb2O55029 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Copb2O55029 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Copb2O55029 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Copb2O55029 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Copb2O55029 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Copb2O55029 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Copb2O55029 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Copb2O55029 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Copb2O55029 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.7■□□□□ 0.9
Copb2O55029 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Copb2O55029 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Copb2O55029 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Copb2O55029 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.7■□□□□ 0.9
Copb2O55029 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.7■□□□□ 0.9
Copb2O55029 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Copb2O55029 Mir5122-201ENSMUST00000175004 89 ntBASIC20.7■□□□□ 0.9
Copb2O55029 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Copb2O55029 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC20.7■□□□□ 0.9
Copb2O55029 Gm37292-201ENSMUST00000192062 758 ntBASIC20.7■□□□□ 0.9
Copb2O55029 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Copb2O55029 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
Copb2O55029 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Copb2O55029 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Copb2O55029 Gm9194-201ENSMUST00000220749 1447 ntBASIC20.7■□□□□ 0.9
Copb2O55029 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Copb2O55029 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Copb2O55029 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.69■□□□□ 0.9
Copb2O55029 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Copb2O55029 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Copb2O55029 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Copb2O55029 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Copb2O55029 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Copb2O55029 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Copb2O55029 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Copb2O55029 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC20.69■□□□□ 0.9
Copb2O55029 Gm20472-201ENSMUST00000174403 1240 ntBASIC20.69■□□□□ 0.9
Copb2O55029 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Copb2O55029 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Copb2O55029 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC20.69■□□□□ 0.9
Copb2O55029 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Copb2O55029 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Copb2O55029 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Copb2O55029 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Copb2O55029 AC121961.1-201ENSMUST00000218594 1779 ntBASIC20.69■□□□□ 0.9
Copb2O55029 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Copb2O55029 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Copb2O55029 Gm45906-201ENSMUST00000208911 1430 ntBASIC20.69■□□□□ 0.9
Copb2O55029 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Copb2O55029 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Copb2O55029 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Copb2O55029 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Copb2O55029 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms