Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cldn5O54942 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Cldn5O54942 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cldn5O54942 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
Cldn5O54942 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.76■□□□□ 0.59
Cldn5O54942 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.76■□□□□ 0.59
Cldn5O54942 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.76■□□□□ 0.59
Cldn5O54942 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cldn5O54942 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cldn5O54942 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Cldn5O54942 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cldn5O54942 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cldn5O54942 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cldn5O54942 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.75■□□□□ 0.59
Cldn5O54942 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cldn5O54942 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cldn5O54942 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cldn5O54942 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cldn5O54942 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cldn5O54942 Gm15375-201ENSMUST00000119510 849 ntBASIC18.75■□□□□ 0.59
Cldn5O54942 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.75■□□□□ 0.59
Cldn5O54942 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cldn5O54942 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.75■□□□□ 0.59
Cldn5O54942 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cldn5O54942 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cldn5O54942 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.75■□□□□ 0.59
Cldn5O54942 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cldn5O54942 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.74■□□□□ 0.59
Cldn5O54942 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cldn5O54942 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cldn5O54942 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cldn5O54942 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cldn5O54942 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cldn5O54942 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cldn5O54942 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Cldn5O54942 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.74■□□□□ 0.59
Cldn5O54942 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cldn5O54942 Gm42545-201ENSMUST00000202755 922 ntBASIC18.74■□□□□ 0.59
Cldn5O54942 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Cldn5O54942 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cldn5O54942 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cldn5O54942 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cldn5O54942 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cldn5O54942 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cldn5O54942 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cldn5O54942 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cldn5O54942 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Cldn5O54942 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cldn5O54942 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Cldn5O54942 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cldn5O54942 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.73■□□□□ 0.59
Cldn5O54942 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.73■□□□□ 0.59
Cldn5O54942 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.73■□□□□ 0.59
Cldn5O54942 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Cldn5O54942 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Cldn5O54942 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cldn5O54942 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Cldn5O54942 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cldn5O54942 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cldn5O54942 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cldn5O54942 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cldn5O54942 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.72■□□□□ 0.59
Cldn5O54942 Mir6349-201ENSMUST00000184059 97 ntBASIC18.72■□□□□ 0.59
Cldn5O54942 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cldn5O54942 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.72■□□□□ 0.59
Cldn5O54942 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cldn5O54942 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cldn5O54942 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cldn5O54942 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cldn5O54942 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cldn5O54942 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Cldn5O54942 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cldn5O54942 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.71■□□□□ 0.59
Cldn5O54942 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cldn5O54942 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cldn5O54942 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cldn5O54942 Gm43183-201ENSMUST00000200632 547 ntBASIC18.71■□□□□ 0.59
Cldn5O54942 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.71■□□□□ 0.59
Cldn5O54942 Gm18025-201ENSMUST00000221733 862 ntBASIC18.71■□□□□ 0.59
Cldn5O54942 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cldn5O54942 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cldn5O54942 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cldn5O54942 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cldn5O54942 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cldn5O54942 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cldn5O54942 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cldn5O54942 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cldn5O54942 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cldn5O54942 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cldn5O54942 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cldn5O54942 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cldn5O54942 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cldn5O54942 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Cldn5O54942 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.7■□□□□ 0.58
Cldn5O54942 Mir2861-201ENSMUST00000175539 82 ntBASIC18.7■□□□□ 0.58
Cldn5O54942 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.7■□□□□ 0.58
Cldn5O54942 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Cldn5O54942 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Cldn5O54942 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cldn5O54942 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms