Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Dkk1O54908 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Dkk1O54908 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC15.75■□□□□ 0.11
Dkk1O54908 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Dkk1O54908 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Dkk1O54908 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Dkk1O54908 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Dkk1O54908 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Dkk1O54908 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Dkk1O54908 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Dkk1O54908 Gm20854-201ENSMUST00000178889 1002 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Dkk1O54908 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC15.74■□□□□ 0.11
Dkk1O54908 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.74■□□□□ 0.11
Dkk1O54908 Rab3c-203ENSMUST00000224180 967 ntBASIC15.74■□□□□ 0.11
Dkk1O54908 AC122769.4-201ENSMUST00000228166 901 ntBASIC15.74■□□□□ 0.11
Dkk1O54908 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Dkk1O54908 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Dkk1O54908 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Dkk1O54908 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Dkk1O54908 Gm43859-201ENSMUST00000200075 1412 ntBASIC15.74■□□□□ 0.11
Dkk1O54908 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Dkk1O54908 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Dkk1O54908 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC15.74■□□□□ 0.11
Dkk1O54908 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Dkk1O54908 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Dkk1O54908 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Dkk1O54908 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Dkk1O54908 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Dkk1O54908 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
Dkk1O54908 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Dkk1O54908 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Dkk1O54908 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Dkk1O54908 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Dkk1O54908 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Dkk1O54908 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Dkk1O54908 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Dkk1O54908 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Dkk1O54908 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Dkk1O54908 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Dkk1O54908 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Dkk1O54908 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Dkk1O54908 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Dkk1O54908 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Dkk1O54908 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Dkk1O54908 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Dkk1O54908 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Dkk1O54908 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Dkk1O54908 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC15.72■□□□□ 0.11
Dkk1O54908 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Dkk1O54908 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Dkk1O54908 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Dkk1O54908 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC15.72■□□□□ 0.11
Dkk1O54908 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC15.72■□□□□ 0.11
Dkk1O54908 Gm20821-201ENSMUST00000179829 1153 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Dkk1O54908 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Dkk1O54908 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC15.72■□□□□ 0.11
Dkk1O54908 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC15.72■□□□□ 0.11
Dkk1O54908 Gm44146-201ENSMUST00000203508 816 ntBASIC15.72■□□□□ 0.11
Dkk1O54908 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Dkk1O54908 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Dkk1O54908 Gm4968-201ENSMUST00000071458 858 ntBASIC15.72■□□□□ 0.11
Dkk1O54908 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Dkk1O54908 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Dkk1O54908 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Dkk1O54908 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Dkk1O54908 Gm38342-201ENSMUST00000195710 2980 ntBASIC15.72■□□□□ 0.11
Dkk1O54908 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Dkk1O54908 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Dkk1O54908 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Dkk1O54908 Gm42922-201ENSMUST00000195887 2078 ntBASIC15.71■□□□□ 0.11
Dkk1O54908 Gm9194-201ENSMUST00000220749 1447 ntBASIC15.71■□□□□ 0.11
Dkk1O54908 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Dkk1O54908 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.71■□□□□ 0.11
Dkk1O54908 Gm43244-201ENSMUST00000196994 1285 ntBASIC15.71■□□□□ 0.11
Dkk1O54908 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC15.71■□□□□ 0.11
Dkk1O54908 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Dkk1O54908 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Dkk1O54908 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Dkk1O54908 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Dkk1O54908 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Dkk1O54908 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Dkk1O54908 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Dkk1O54908 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Dkk1O54908 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Dkk1O54908 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Dkk1O54908 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC15.7■□□□□ 0.1
Dkk1O54908 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Dkk1O54908 Gm9723-201ENSMUST00000192100 457 ntBASIC15.7■□□□□ 0.1
Dkk1O54908 Gm38018-201ENSMUST00000195651 540 ntBASIC15.7■□□□□ 0.1
Dkk1O54908 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC15.7■□□□□ 0.1
Dkk1O54908 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC15.7■□□□□ 0.1
Dkk1O54908 CT010480.1-201ENSMUST00000223612 363 ntBASIC15.7■□□□□ 0.1
Dkk1O54908 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Dkk1O54908 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Dkk1O54908 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Dkk1O54908 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Dkk1O54908 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC15.69■□□□□ 0.1
Dkk1O54908 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Dkk1O54908 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Dkk1O54908 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms