Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Abca4O35600 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Abca4O35600 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.02■□□□□ 0.32
Abca4O35600 Gm7638-201ENSMUST00000121348 967 ntBASIC17.02■□□□□ 0.32
Abca4O35600 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Abca4O35600 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Abca4O35600 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.02■□□□□ 0.32
Abca4O35600 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Abca4O35600 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Abca4O35600 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Abca4O35600 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Abca4O35600 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Abca4O35600 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.02■□□□□ 0.31
Abca4O35600 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Abca4O35600 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Abca4O35600 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.31
Abca4O35600 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Abca4O35600 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Abca4O35600 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Abca4O35600 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Abca4O35600 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Abca4O35600 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Abca4O35600 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Abca4O35600 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Abca4O35600 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Abca4O35600 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Abca4O35600 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Abca4O35600 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Abca4O35600 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.01■□□□□ 0.31
Abca4O35600 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Abca4O35600 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.01■□□□□ 0.31
Abca4O35600 Gm45328-201ENSMUST00000210942 917 ntBASIC17.01■□□□□ 0.31
Abca4O35600 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Abca4O35600 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Abca4O35600 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17■□□□□ 0.31
Abca4O35600 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Abca4O35600 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Abca4O35600 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Abca4O35600 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Abca4O35600 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17■□□□□ 0.31
Abca4O35600 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Abca4O35600 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC17■□□□□ 0.31
Abca4O35600 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17■□□□□ 0.31
Abca4O35600 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Abca4O35600 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Abca4O35600 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Abca4O35600 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Abca4O35600 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17■□□□□ 0.31
Abca4O35600 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17■□□□□ 0.31
Abca4O35600 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Abca4O35600 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Abca4O35600 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Abca4O35600 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.99■□□□□ 0.31
Abca4O35600 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Abca4O35600 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Abca4O35600 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Abca4O35600 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Abca4O35600 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Abca4O35600 Gm2756-201ENSMUST00000195851 400 ntBASIC16.99■□□□□ 0.31
Abca4O35600 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Abca4O35600 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
Abca4O35600 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Abca4O35600 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Abca4O35600 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Abca4O35600 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Abca4O35600 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC16.99■□□□□ 0.31
Abca4O35600 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
Abca4O35600 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Abca4O35600 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC16.98■□□□□ 0.31
Abca4O35600 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Abca4O35600 Gm6736-201ENSMUST00000166583 948 ntBASIC16.98■□□□□ 0.31
Abca4O35600 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Abca4O35600 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Abca4O35600 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Abca4O35600 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Abca4O35600 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Abca4O35600 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
Abca4O35600 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
Abca4O35600 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC16.98■□□□□ 0.31
Abca4O35600 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.98■□□□□ 0.31
Abca4O35600 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.98■□□□□ 0.31
Abca4O35600 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.98■□□□□ 0.31
Abca4O35600 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.98■□□□□ 0.31
Abca4O35600 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Abca4O35600 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Abca4O35600 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Abca4O35600 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Abca4O35600 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Abca4O35600 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Abca4O35600 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.97■□□□□ 0.31
Abca4O35600 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Abca4O35600 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.97■□□□□ 0.31
Abca4O35600 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Abca4O35600 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.97■□□□□ 0.31
Abca4O35600 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Abca4O35600 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Abca4O35600 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Abca4O35600 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Abca4O35600 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.97■□□□□ 0.31
Abca4O35600 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms