Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.33■□□□□ 0.85
Stx1aO35526 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
Stx1aO35526 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Stx1aO35526 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Stx1aO35526 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Stx1aO35526 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Stx1aO35526 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Stx1aO35526 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Stx1aO35526 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Stx1aO35526 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Stx1aO35526 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Stx1aO35526 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Stx1aO35526 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Stx1aO35526 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Stx1aO35526 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Stx1aO35526 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Stx1aO35526 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.32■□□□□ 0.84
Stx1aO35526 Gm43017-201ENSMUST00000198296 752 ntBASIC20.32■□□□□ 0.84
Stx1aO35526 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Stx1aO35526 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Stx1aO35526 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Stx1aO35526 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Stx1aO35526 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Stx1aO35526 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Stx1aO35526 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Stx1aO35526 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Stx1aO35526 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Stx1aO35526 Gm37374-201ENSMUST00000194954 1829 ntBASIC20.32■□□□□ 0.84
Stx1aO35526 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Stx1aO35526 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC20.31■□□□□ 0.84
Stx1aO35526 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Stx1aO35526 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Stx1aO35526 Gm10461-201ENSMUST00000202073 4786 ntBASIC20.31■□□□□ 0.84
Stx1aO35526 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Stx1aO35526 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Stx1aO35526 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.31■□□□□ 0.84
Stx1aO35526 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.31■□□□□ 0.84
Stx1aO35526 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.31■□□□□ 0.84
Stx1aO35526 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Stx1aO35526 Gm15635-204ENSMUST00000208024 2539 ntBASIC20.31■□□□□ 0.84
Stx1aO35526 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Stx1aO35526 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Stx1aO35526 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Stx1aO35526 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Stx1aO35526 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Stx1aO35526 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Stx1aO35526 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Stx1aO35526 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Stx1aO35526 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Stx1aO35526 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Stx1aO35526 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Stx1aO35526 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Stx1aO35526 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.3■□□□□ 0.84
Stx1aO35526 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Stx1aO35526 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Stx1aO35526 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Stx1aO35526 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Stx1aO35526 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Stx1aO35526 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Stx1aO35526 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Stx1aO35526 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Stx1aO35526 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Stx1aO35526 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Stx1aO35526 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Stx1aO35526 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
Stx1aO35526 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Stx1aO35526 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Stx1aO35526 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Stx1aO35526 Gm37194-201ENSMUST00000193092 3031 ntBASIC20.29■□□□□ 0.84
Stx1aO35526 Gm13146-201ENSMUST00000118508 780 ntBASIC20.29■□□□□ 0.84
Stx1aO35526 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Stx1aO35526 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Stx1aO35526 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Stx1aO35526 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Stx1aO35526 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Stx1aO35526 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
Stx1aO35526 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Stx1aO35526 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Stx1aO35526 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Stx1aO35526 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Stx1aO35526 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Stx1aO35526 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Stx1aO35526 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Stx1aO35526 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Stx1aO35526 Gm43060-201ENSMUST00000200621 289 ntBASIC20.28■□□□□ 0.84
Stx1aO35526 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.28■□□□□ 0.84
Stx1aO35526 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
Stx1aO35526 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Stx1aO35526 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Stx1aO35526 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Stx1aO35526 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Stx1aO35526 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Stx1aO35526 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Stx1aO35526 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Stx1aO35526 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC20.27■□□□□ 0.84
Stx1aO35526 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Stx1aO35526 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Stx1aO35526 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Stx1aO35526 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Stx1aO35526 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms