Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clk2O35491 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Clk2O35491 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clk2O35491 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.69■□□□□ 0.74
Clk2O35491 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
Clk2O35491 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.69■□□□□ 0.74
Clk2O35491 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clk2O35491 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC19.68■□□□□ 0.74
Clk2O35491 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clk2O35491 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.68■□□□□ 0.74
Clk2O35491 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Clk2O35491 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.68■□□□□ 0.74
Clk2O35491 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clk2O35491 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Clk2O35491 AC166341.7-201ENSMUST00000221698 126 ntBASIC19.68■□□□□ 0.74
Clk2O35491 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clk2O35491 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clk2O35491 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clk2O35491 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.68■□□□□ 0.74
Clk2O35491 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clk2O35491 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clk2O35491 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Clk2O35491 Tgds-204ENSMUST00000228543 1594 ntBASIC19.67■□□□□ 0.74
Clk2O35491 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.67■□□□□ 0.74
Clk2O35491 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Clk2O35491 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Clk2O35491 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Clk2O35491 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clk2O35491 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Clk2O35491 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.67■□□□□ 0.74
Clk2O35491 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clk2O35491 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clk2O35491 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clk2O35491 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Clk2O35491 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clk2O35491 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.66■□□□□ 0.74
Clk2O35491 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.66■□□□□ 0.74
Clk2O35491 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clk2O35491 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Clk2O35491 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clk2O35491 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clk2O35491 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clk2O35491 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Clk2O35491 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clk2O35491 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.65■□□□□ 0.74
Clk2O35491 Mir5122-201ENSMUST00000175004 89 ntBASIC19.65■□□□□ 0.74
Clk2O35491 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.65■□□□□ 0.74
Clk2O35491 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Clk2O35491 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clk2O35491 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Clk2O35491 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Clk2O35491 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clk2O35491 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.65■□□□□ 0.74
Clk2O35491 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Clk2O35491 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Clk2O35491 Gm37055-201ENSMUST00000191866 133 ntBASIC19.64■□□□□ 0.73
Clk2O35491 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.64■□□□□ 0.73
Clk2O35491 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clk2O35491 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clk2O35491 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clk2O35491 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clk2O35491 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clk2O35491 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clk2O35491 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clk2O35491 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clk2O35491 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
Clk2O35491 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clk2O35491 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Clk2O35491 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Clk2O35491 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Clk2O35491 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clk2O35491 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clk2O35491 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Clk2O35491 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clk2O35491 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Clk2O35491 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.62■□□□□ 0.73
Clk2O35491 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clk2O35491 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clk2O35491 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clk2O35491 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clk2O35491 Gm12382-201ENSMUST00000122005 922 ntBASIC19.62■□□□□ 0.73
Clk2O35491 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.62■□□□□ 0.73
Clk2O35491 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Clk2O35491 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Clk2O35491 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.62■□□□□ 0.73
Clk2O35491 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clk2O35491 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Clk2O35491 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Clk2O35491 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Clk2O35491 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Clk2O35491 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Clk2O35491 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clk2O35491 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clk2O35491 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clk2O35491 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.61■□□□□ 0.73
Clk2O35491 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.61■□□□□ 0.73
Clk2O35491 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Clk2O35491 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Clk2O35491 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.61■□□□□ 0.73
Clk2O35491 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms