Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clcn6O35454 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Clcn6O35454 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clcn6O35454 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.11■□□□□ 0.65
Clcn6O35454 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clcn6O35454 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clcn6O35454 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clcn6O35454 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.1■□□□□ 0.65
Clcn6O35454 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clcn6O35454 Gm11491-201ENSMUST00000129441 1118 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Clcn6O35454 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
Clcn6O35454 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC19.1■□□□□ 0.65
Clcn6O35454 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.1■□□□□ 0.65
Clcn6O35454 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.1■□□□□ 0.65
Clcn6O35454 AC125539.1-202ENSMUST00000226449 670 ntBASIC19.1■□□□□ 0.65
Clcn6O35454 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clcn6O35454 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clcn6O35454 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clcn6O35454 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Clcn6O35454 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Clcn6O35454 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Clcn6O35454 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Clcn6O35454 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Clcn6O35454 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clcn6O35454 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clcn6O35454 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Clcn6O35454 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
Clcn6O35454 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Clcn6O35454 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Clcn6O35454 Gm27801-201ENSMUST00000184174 223 ntBASIC19.09■□□□□ 0.65
Clcn6O35454 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Clcn6O35454 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.09■□□□□ 0.65
Clcn6O35454 Gm6991-201ENSMUST00000218475 1178 ntBASIC19.09■□□□□ 0.65
Clcn6O35454 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clcn6O35454 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Clcn6O35454 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clcn6O35454 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clcn6O35454 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clcn6O35454 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Clcn6O35454 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clcn6O35454 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Clcn6O35454 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.08■□□□□ 0.65
Clcn6O35454 Gm14579-201ENSMUST00000117068 283 ntBASIC19.08■□□□□ 0.64
Clcn6O35454 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.08■□□□□ 0.64
Clcn6O35454 2700097O09Rik-201ENSMUST00000021406 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clcn6O35454 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clcn6O35454 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clcn6O35454 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clcn6O35454 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clcn6O35454 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clcn6O35454 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Clcn6O35454 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clcn6O35454 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Clcn6O35454 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Clcn6O35454 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clcn6O35454 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Clcn6O35454 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.07■□□□□ 0.64
Clcn6O35454 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clcn6O35454 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.07■□□□□ 0.64
Clcn6O35454 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.07■□□□□ 0.64
Clcn6O35454 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC19.07■□□□□ 0.64
Clcn6O35454 Gm26736-201ENSMUST00000180425 1236 ntBASIC19.07■□□□□ 0.64
Clcn6O35454 Gm29018-201ENSMUST00000188707 925 ntTSL 3 BASIC19.07■□□□□ 0.64
Clcn6O35454 Gm43060-201ENSMUST00000200621 289 ntBASIC19.07■□□□□ 0.64
Clcn6O35454 Gm45071-201ENSMUST00000205353 571 ntBASIC19.07■□□□□ 0.64
Clcn6O35454 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.07■□□□□ 0.64
Clcn6O35454 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clcn6O35454 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clcn6O35454 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clcn6O35454 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clcn6O35454 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clcn6O35454 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Clcn6O35454 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clcn6O35454 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Clcn6O35454 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clcn6O35454 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clcn6O35454 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Clcn6O35454 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clcn6O35454 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Clcn6O35454 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.06■□□□□ 0.64
Clcn6O35454 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Clcn6O35454 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
Clcn6O35454 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clcn6O35454 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Clcn6O35454 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clcn6O35454 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clcn6O35454 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clcn6O35454 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clcn6O35454 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Clcn6O35454 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Clcn6O35454 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clcn6O35454 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.05■□□□□ 0.64
Clcn6O35454 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.05■□□□□ 0.64
Clcn6O35454 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clcn6O35454 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.05■□□□□ 0.64
Clcn6O35454 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.05■□□□□ 0.64
Clcn6O35454 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clcn6O35454 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clcn6O35454 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Clcn6O35454 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms