Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Pkd1O08852 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pkd1O08852 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.56
Pkd1O08852 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pkd1O08852 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Pkd1O08852 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pkd1O08852 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pkd1O08852 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pkd1O08852 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pkd1O08852 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC11.52□□□□□ -0.57
Pkd1O08852 Gm27742-201ENSMUST00000184667 60 ntBASIC11.52□□□□□ -0.57
Pkd1O08852 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Pkd1O08852 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Pkd1O08852 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pkd1O08852 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pkd1O08852 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Pkd1O08852 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Pkd1O08852 Gm16061-201ENSMUST00000122167 857 ntBASIC11.52□□□□□ -0.57
Pkd1O08852 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pkd1O08852 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pkd1O08852 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Pkd1O08852 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Pkd1O08852 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pkd1O08852 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pkd1O08852 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pkd1O08852 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pkd1O08852 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pkd1O08852 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Pkd1O08852 Spsb2-203ENSMUST00000112473 1322 ntBASIC11.51□□□□□ -0.57
Pkd1O08852 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Pkd1O08852 Gm7213-201ENSMUST00000215977 950 ntBASIC11.51□□□□□ -0.57
Pkd1O08852 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Pkd1O08852 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pkd1O08852 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Pkd1O08852 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pkd1O08852 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pkd1O08852 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Pkd1O08852 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pkd1O08852 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pkd1O08852 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pkd1O08852 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pkd1O08852 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC11.51□□□□□ -0.57
Pkd1O08852 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pkd1O08852 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pkd1O08852 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pkd1O08852 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pkd1O08852 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Pkd1O08852 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pkd1O08852 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Pkd1O08852 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pkd1O08852 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pkd1O08852 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pkd1O08852 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pkd1O08852 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pkd1O08852 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pkd1O08852 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC11.5□□□□□ -0.57
Pkd1O08852 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pkd1O08852 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pkd1O08852 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pkd1O08852 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC11.5□□□□□ -0.57
Pkd1O08852 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pkd1O08852 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC11.5□□□□□ -0.57
Pkd1O08852 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC11.5□□□□□ -0.57
Pkd1O08852 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC11.5□□□□□ -0.57
Pkd1O08852 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pkd1O08852 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pkd1O08852 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC11.5□□□□□ -0.57
Pkd1O08852 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC11.5□□□□□ -0.57
Pkd1O08852 Gm18115-201ENSMUST00000221209 621 ntBASIC11.5□□□□□ -0.57
Pkd1O08852 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pkd1O08852 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Pkd1O08852 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pkd1O08852 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Pkd1O08852 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
Pkd1O08852 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Pkd1O08852 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pkd1O08852 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pkd1O08852 Gm9694-201ENSMUST00000193347 1189 ntBASIC11.49□□□□□ -0.57
Pkd1O08852 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Pkd1O08852 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pkd1O08852 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pkd1O08852 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pkd1O08852 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pkd1O08852 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pkd1O08852 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pkd1O08852 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pkd1O08852 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pkd1O08852 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pkd1O08852 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pkd1O08852 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Pkd1O08852 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Pkd1O08852 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pkd1O08852 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pkd1O08852 Gm27525-201ENSMUST00000184465 107 ntBASIC11.49□□□□□ -0.57
Pkd1O08852 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC11.49□□□□□ -0.57
Pkd1O08852 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pkd1O08852 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pkd1O08852 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pkd1O08852 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pkd1O08852 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms