Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Ercc2O08811 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
Ercc2O08811 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ercc2O08811 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ercc2O08811 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
Ercc2O08811 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Ercc2O08811 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Ercc2O08811 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ercc2O08811 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Ercc2O08811 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.48■□□□□ 0.55
Ercc2O08811 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Ercc2O08811 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.48■□□□□ 0.55
Ercc2O08811 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.48■□□□□ 0.55
Ercc2O08811 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.48■□□□□ 0.55
Ercc2O08811 Grk6-206ENSMUST00000224995 2971 ntBASIC18.48■□□□□ 0.55
Ercc2O08811 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ercc2O08811 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Ercc2O08811 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ercc2O08811 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ercc2O08811 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ercc2O08811 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ercc2O08811 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ercc2O08811 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ercc2O08811 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ercc2O08811 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Ercc2O08811 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ercc2O08811 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ercc2O08811 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ercc2O08811 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
Ercc2O08811 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ercc2O08811 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ercc2O08811 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Ercc2O08811 Gm12441-201ENSMUST00000121806 588 ntBASIC18.47■□□□□ 0.55
Ercc2O08811 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.47■□□□□ 0.55
Ercc2O08811 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ercc2O08811 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ercc2O08811 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ercc2O08811 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ercc2O08811 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.47■□□□□ 0.55
Ercc2O08811 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ercc2O08811 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ercc2O08811 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ercc2O08811 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ercc2O08811 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ercc2O08811 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ercc2O08811 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ercc2O08811 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ercc2O08811 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Ercc2O08811 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ercc2O08811 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Ercc2O08811 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ercc2O08811 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ercc2O08811 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ercc2O08811 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ercc2O08811 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ercc2O08811 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ercc2O08811 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ercc2O08811 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.46■□□□□ 0.55
Ercc2O08811 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ercc2O08811 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ercc2O08811 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ercc2O08811 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ercc2O08811 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Ercc2O08811 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ercc2O08811 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ercc2O08811 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.45■□□□□ 0.54
Ercc2O08811 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ercc2O08811 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.45■□□□□ 0.54
Ercc2O08811 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ercc2O08811 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.45■□□□□ 0.54
Ercc2O08811 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.45■□□□□ 0.54
Ercc2O08811 Gm38285-201ENSMUST00000192928 922 ntBASIC18.45■□□□□ 0.54
Ercc2O08811 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ercc2O08811 Zfp783-201ENSMUST00000095946 670 ntBASIC18.45■□□□□ 0.54
Ercc2O08811 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Ercc2O08811 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Ercc2O08811 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ercc2O08811 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ercc2O08811 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ercc2O08811 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ercc2O08811 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ercc2O08811 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ercc2O08811 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ercc2O08811 Flg-201ENSMUST00000050758 1488 ntBASIC18.45■□□□□ 0.54
Ercc2O08811 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ercc2O08811 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ercc2O08811 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ercc2O08811 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
Ercc2O08811 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ercc2O08811 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ercc2O08811 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ercc2O08811 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ercc2O08811 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ercc2O08811 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.44■□□□□ 0.54
Ercc2O08811 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ercc2O08811 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ercc2O08811 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ercc2O08811 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.44■□□□□ 0.54
Ercc2O08811 Gm2559-201ENSMUST00000201323 363 ntBASIC18.44■□□□□ 0.54
Ercc2O08811 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms