Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ebf3O08791 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ebf3O08791 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ebf3O08791 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.73■□□□□ 0.59
Ebf3O08791 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ebf3O08791 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ebf3O08791 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ebf3O08791 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ebf3O08791 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ebf3O08791 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ebf3O08791 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ebf3O08791 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ebf3O08791 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ebf3O08791 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ebf3O08791 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Ebf3O08791 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Ebf3O08791 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Ebf3O08791 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Ebf3O08791 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Ebf3O08791 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Ebf3O08791 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ebf3O08791 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ebf3O08791 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ebf3O08791 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ebf3O08791 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.71■□□□□ 0.59
Ebf3O08791 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ebf3O08791 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.71■□□□□ 0.59
Ebf3O08791 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ebf3O08791 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ebf3O08791 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ebf3O08791 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ebf3O08791 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Ebf3O08791 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ebf3O08791 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ebf3O08791 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.71■□□□□ 0.59
Ebf3O08791 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ebf3O08791 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ebf3O08791 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ebf3O08791 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.71■□□□□ 0.59
Ebf3O08791 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
Ebf3O08791 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Ebf3O08791 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Ebf3O08791 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ebf3O08791 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ebf3O08791 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Ebf3O08791 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ebf3O08791 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.7■□□□□ 0.58
Ebf3O08791 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ebf3O08791 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ebf3O08791 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ebf3O08791 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ebf3O08791 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ebf3O08791 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ebf3O08791 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Ebf3O08791 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ebf3O08791 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Ebf3O08791 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ebf3O08791 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ebf3O08791 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ebf3O08791 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Ebf3O08791 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.69■□□□□ 0.58
Ebf3O08791 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Ebf3O08791 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.69■□□□□ 0.58
Ebf3O08791 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Ebf3O08791 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ebf3O08791 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ebf3O08791 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ebf3O08791 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ebf3O08791 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ebf3O08791 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ebf3O08791 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.68■□□□□ 0.58
Ebf3O08791 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.68■□□□□ 0.58
Ebf3O08791 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ebf3O08791 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ebf3O08791 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ebf3O08791 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ebf3O08791 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.68■□□□□ 0.58
Ebf3O08791 Mtag2-201ENSMUST00000058665 714 ntBASIC18.68■□□□□ 0.58
Ebf3O08791 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ebf3O08791 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ebf3O08791 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ebf3O08791 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ebf3O08791 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ebf3O08791 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.67■□□□□ 0.58
Ebf3O08791 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ebf3O08791 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Ebf3O08791 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ebf3O08791 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.67■□□□□ 0.58
Ebf3O08791 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ebf3O08791 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ebf3O08791 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ebf3O08791 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.67■□□□□ 0.58
Ebf3O08791 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Ebf3O08791 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ebf3O08791 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.67■□□□□ 0.58
Ebf3O08791 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ebf3O08791 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ebf3O08791 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ebf3O08791 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ebf3O08791 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms