Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.34■□□□□ 0.37
Polr2jO08740 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.34■□□□□ 0.37
Polr2jO08740 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Polr2jO08740 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Polr2jO08740 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Polr2jO08740 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Polr2jO08740 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.34■□□□□ 0.37
Polr2jO08740 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Polr2jO08740 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Polr2jO08740 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Polr2jO08740 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Polr2jO08740 Reep4-203ENSMUST00000226563 1444 ntBASIC17.33■□□□□ 0.36
Polr2jO08740 Gm13534-201ENSMUST00000121169 513 ntBASIC17.33■□□□□ 0.36
Polr2jO08740 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Polr2jO08740 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Polr2jO08740 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Polr2jO08740 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Polr2jO08740 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Polr2jO08740 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Polr2jO08740 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Polr2jO08740 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Polr2jO08740 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Polr2jO08740 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Polr2jO08740 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Polr2jO08740 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Polr2jO08740 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Polr2jO08740 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Polr2jO08740 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Polr2jO08740 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Polr2jO08740 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Polr2jO08740 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Polr2jO08740 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Polr2jO08740 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Polr2jO08740 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Polr2jO08740 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Polr2jO08740 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Polr2jO08740 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Polr2jO08740 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Polr2jO08740 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Polr2jO08740 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Polr2jO08740 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.31■□□□□ 0.36
Polr2jO08740 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.31■□□□□ 0.36
Polr2jO08740 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Polr2jO08740 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.31■□□□□ 0.36
Polr2jO08740 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Polr2jO08740 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Polr2jO08740 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.31■□□□□ 0.36
Polr2jO08740 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Polr2jO08740 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Polr2jO08740 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Polr2jO08740 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Polr2jO08740 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Polr2jO08740 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Polr2jO08740 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Polr2jO08740 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Polr2jO08740 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Polr2jO08740 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Polr2jO08740 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Polr2jO08740 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Polr2jO08740 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Polr2jO08740 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Polr2jO08740 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.3■□□□□ 0.36
Polr2jO08740 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.3■□□□□ 0.36
Polr2jO08740 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Polr2jO08740 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Polr2jO08740 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.3■□□□□ 0.36
Polr2jO08740 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Polr2jO08740 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Polr2jO08740 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Polr2jO08740 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Polr2jO08740 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Polr2jO08740 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Polr2jO08740 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Polr2jO08740 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Polr2jO08740 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Polr2jO08740 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Polr2jO08740 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.29■□□□□ 0.36
Polr2jO08740 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Polr2jO08740 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Polr2jO08740 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Polr2jO08740 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Polr2jO08740 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.29■□□□□ 0.36
Polr2jO08740 Gm8969-201ENSMUST00000199694 526 ntBASIC17.29■□□□□ 0.36
Polr2jO08740 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Polr2jO08740 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Polr2jO08740 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Polr2jO08740 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Polr2jO08740 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Polr2jO08740 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Polr2jO08740 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Polr2jO08740 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Polr2jO08740 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Polr2jO08740 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Polr2jO08740 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Polr2jO08740 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Polr2jO08740 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Polr2jO08740 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Polr2jO08740 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Polr2jO08740 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.28■□□□□ 0.36
Polr2jO08740 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms