Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
B020004C17RikJ3QP07 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
B020004C17RikJ3QP07 Gm45906-201ENSMUST00000208911 1430 ntBASIC20.29■□□□□ 0.84
B020004C17RikJ3QP07 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
B020004C17RikJ3QP07 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
B020004C17RikJ3QP07 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
B020004C17RikJ3QP07 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
B020004C17RikJ3QP07 Gm22697-201ENSMUST00000175194 63 ntBASIC20.29■□□□□ 0.84
B020004C17RikJ3QP07 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
B020004C17RikJ3QP07 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC20.29■□□□□ 0.84
B020004C17RikJ3QP07 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
B020004C17RikJ3QP07 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
B020004C17RikJ3QP07 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
B020004C17RikJ3QP07 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.28■□□□□ 0.84
B020004C17RikJ3QP07 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
B020004C17RikJ3QP07 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
B020004C17RikJ3QP07 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC20.28■□□□□ 0.84
B020004C17RikJ3QP07 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC20.28■□□□□ 0.84
B020004C17RikJ3QP07 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
B020004C17RikJ3QP07 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
B020004C17RikJ3QP07 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
B020004C17RikJ3QP07 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
B020004C17RikJ3QP07 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
B020004C17RikJ3QP07 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
B020004C17RikJ3QP07 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
B020004C17RikJ3QP07 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
B020004C17RikJ3QP07 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
B020004C17RikJ3QP07 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
B020004C17RikJ3QP07 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
B020004C17RikJ3QP07 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.27■□□□□ 0.84
B020004C17RikJ3QP07 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
B020004C17RikJ3QP07 Gm16061-201ENSMUST00000122167 857 ntBASIC20.27■□□□□ 0.84
B020004C17RikJ3QP07 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC20.27■□□□□ 0.84
B020004C17RikJ3QP07 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
B020004C17RikJ3QP07 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
B020004C17RikJ3QP07 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
B020004C17RikJ3QP07 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
B020004C17RikJ3QP07 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
B020004C17RikJ3QP07 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
B020004C17RikJ3QP07 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
B020004C17RikJ3QP07 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
B020004C17RikJ3QP07 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
B020004C17RikJ3QP07 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
B020004C17RikJ3QP07 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
B020004C17RikJ3QP07 Gm25016-201ENSMUST00000158399 131 ntBASIC20.26■□□□□ 0.83
B020004C17RikJ3QP07 Gm27741-201ENSMUST00000185060 237 ntBASIC20.26■□□□□ 0.83
B020004C17RikJ3QP07 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
B020004C17RikJ3QP07 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
B020004C17RikJ3QP07 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
B020004C17RikJ3QP07 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
B020004C17RikJ3QP07 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
B020004C17RikJ3QP07 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
B020004C17RikJ3QP07 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
B020004C17RikJ3QP07 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
B020004C17RikJ3QP07 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC20.25■□□□□ 0.83
B020004C17RikJ3QP07 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
B020004C17RikJ3QP07 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
B020004C17RikJ3QP07 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
B020004C17RikJ3QP07 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
B020004C17RikJ3QP07 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
B020004C17RikJ3QP07 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
B020004C17RikJ3QP07 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
B020004C17RikJ3QP07 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
B020004C17RikJ3QP07 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
B020004C17RikJ3QP07 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
B020004C17RikJ3QP07 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
B020004C17RikJ3QP07 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
B020004C17RikJ3QP07 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
B020004C17RikJ3QP07 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC20.24■□□□□ 0.83
B020004C17RikJ3QP07 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
B020004C17RikJ3QP07 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
B020004C17RikJ3QP07 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
B020004C17RikJ3QP07 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
B020004C17RikJ3QP07 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.24■□□□□ 0.83
B020004C17RikJ3QP07 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
B020004C17RikJ3QP07 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
B020004C17RikJ3QP07 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
B020004C17RikJ3QP07 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC20.24■□□□□ 0.83
B020004C17RikJ3QP07 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
B020004C17RikJ3QP07 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
B020004C17RikJ3QP07 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
B020004C17RikJ3QP07 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
B020004C17RikJ3QP07 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
B020004C17RikJ3QP07 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
B020004C17RikJ3QP07 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
B020004C17RikJ3QP07 AC121961.1-201ENSMUST00000218594 1779 ntBASIC20.23■□□□□ 0.83
B020004C17RikJ3QP07 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
B020004C17RikJ3QP07 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
B020004C17RikJ3QP07 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
B020004C17RikJ3QP07 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
B020004C17RikJ3QP07 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
B020004C17RikJ3QP07 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC20.23■□□□□ 0.83
B020004C17RikJ3QP07 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC20.23■□□□□ 0.83
B020004C17RikJ3QP07 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
B020004C17RikJ3QP07 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC20.23■□□□□ 0.83
B020004C17RikJ3QP07 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
B020004C17RikJ3QP07 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
B020004C17RikJ3QP07 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
B020004C17RikJ3QP07 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
B020004C17RikJ3QP07 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms