Protein–RNA interactions for Protein: F8VPU6

Usp9y, Ubiquitin-specific peptidase 9, Y chromosome, mousemouse

Predictions only

Length 2,556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp9yF8VPU6 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
Usp9yF8VPU6 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp9yF8VPU6 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp9yF8VPU6 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.41□□□□□ -0.1
Usp9yF8VPU6 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp9yF8VPU6 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp9yF8VPU6 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Usp9yF8VPU6 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp9yF8VPU6 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp9yF8VPU6 Gm10654-201ENSMUST00000098653 1633 ntBASIC14.41□□□□□ -0.1
Usp9yF8VPU6 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp9yF8VPU6 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp9yF8VPU6 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp9yF8VPU6 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp9yF8VPU6 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp9yF8VPU6 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp9yF8VPU6 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp9yF8VPU6 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp9yF8VPU6 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC14.41□□□□□ -0.1
Usp9yF8VPU6 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp9yF8VPU6 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp9yF8VPU6 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp9yF8VPU6 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.4□□□□□ -0.1
Usp9yF8VPU6 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.4□□□□□ -0.1
Usp9yF8VPU6 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp9yF8VPU6 Gm38027-201ENSMUST00000192315 235 ntBASIC14.4□□□□□ -0.1
Usp9yF8VPU6 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp9yF8VPU6 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp9yF8VPU6 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.4□□□□□ -0.1
Usp9yF8VPU6 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp9yF8VPU6 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp9yF8VPU6 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp9yF8VPU6 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp9yF8VPU6 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp9yF8VPU6 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp9yF8VPU6 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp9yF8VPU6 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp9yF8VPU6 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC14.39□□□□□ -0.11
Usp9yF8VPU6 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp9yF8VPU6 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp9yF8VPU6 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Usp9yF8VPU6 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp9yF8VPU6 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp9yF8VPU6 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp9yF8VPU6 Gm27357-201ENSMUST00000183754 135 ntBASIC14.39□□□□□ -0.11
Usp9yF8VPU6 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp9yF8VPU6 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.39□□□□□ -0.11
Usp9yF8VPU6 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp9yF8VPU6 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp9yF8VPU6 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp9yF8VPU6 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp9yF8VPU6 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp9yF8VPU6 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Usp9yF8VPU6 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp9yF8VPU6 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp9yF8VPU6 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Usp9yF8VPU6 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Usp9yF8VPU6 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Usp9yF8VPU6 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.38□□□□□ -0.11
Usp9yF8VPU6 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Usp9yF8VPU6 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp9yF8VPU6 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp9yF8VPU6 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Usp9yF8VPU6 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp9yF8VPU6 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp9yF8VPU6 Gm8309-201ENSMUST00000206627 1448 ntBASIC14.38□□□□□ -0.11
Usp9yF8VPU6 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp9yF8VPU6 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Usp9yF8VPU6 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Usp9yF8VPU6 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp9yF8VPU6 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Usp9yF8VPU6 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp9yF8VPU6 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.37□□□□□ -0.11
Usp9yF8VPU6 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.37□□□□□ -0.11
Usp9yF8VPU6 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp9yF8VPU6 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp9yF8VPU6 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp9yF8VPU6 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp9yF8VPU6 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.37□□□□□ -0.11
Usp9yF8VPU6 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp9yF8VPU6 Gm27389-201ENSMUST00000183622 195 ntBASIC14.37□□□□□ -0.11
Usp9yF8VPU6 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp9yF8VPU6 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.37□□□□□ -0.11
Usp9yF8VPU6 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp9yF8VPU6 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp9yF8VPU6 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp9yF8VPU6 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp9yF8VPU6 Gm16061-201ENSMUST00000122167 857 ntBASIC14.36□□□□□ -0.11
Usp9yF8VPU6 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Usp9yF8VPU6 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.36□□□□□ -0.11
Usp9yF8VPU6 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Usp9yF8VPU6 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp9yF8VPU6 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp9yF8VPU6 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp9yF8VPU6 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp9yF8VPU6 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp9yF8VPU6 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp9yF8VPU6 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC14.36□□□□□ -0.11
Usp9yF8VPU6 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp9yF8VPU6 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms