Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC21.8■■□□□ 1.08
Ube4aE9Q735 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ube4aE9Q735 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Ube4aE9Q735 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC21.8■■□□□ 1.08
Ube4aE9Q735 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ube4aE9Q735 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ube4aE9Q735 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ube4aE9Q735 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ube4aE9Q735 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ube4aE9Q735 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ube4aE9Q735 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ube4aE9Q735 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ube4aE9Q735 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
Ube4aE9Q735 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
Ube4aE9Q735 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ube4aE9Q735 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ube4aE9Q735 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ube4aE9Q735 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ube4aE9Q735 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ube4aE9Q735 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ube4aE9Q735 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC21.78■■□□□ 1.08
Ube4aE9Q735 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC21.78■■□□□ 1.08
Ube4aE9Q735 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ube4aE9Q735 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ube4aE9Q735 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
Ube4aE9Q735 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ube4aE9Q735 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Ube4aE9Q735 Gm42922-201ENSMUST00000195887 2078 ntBASIC21.78■■□□□ 1.08
Ube4aE9Q735 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.78■■□□□ 1.08
Ube4aE9Q735 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ube4aE9Q735 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Ube4aE9Q735 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Ube4aE9Q735 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Ube4aE9Q735 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ube4aE9Q735 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ube4aE9Q735 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ube4aE9Q735 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ube4aE9Q735 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ube4aE9Q735 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Ube4aE9Q735 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Ube4aE9Q735 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ube4aE9Q735 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ube4aE9Q735 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ube4aE9Q735 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ube4aE9Q735 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC21.76■■□□□ 1.07
Ube4aE9Q735 Gm10517-202ENSMUST00000192970 758 ntBASIC21.76■■□□□ 1.07
Ube4aE9Q735 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC21.76■■□□□ 1.07
Ube4aE9Q735 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ube4aE9Q735 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC21.76■■□□□ 1.07
Ube4aE9Q735 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ube4aE9Q735 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ube4aE9Q735 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ube4aE9Q735 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
Ube4aE9Q735 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ube4aE9Q735 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ube4aE9Q735 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ube4aE9Q735 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ube4aE9Q735 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ube4aE9Q735 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ube4aE9Q735 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC21.75■■□□□ 1.07
Ube4aE9Q735 AC130671.1-201ENSMUST00000227384 1237 ntBASIC21.75■■□□□ 1.07
Ube4aE9Q735 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ube4aE9Q735 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC21.75■■□□□ 1.07
Ube4aE9Q735 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ube4aE9Q735 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ube4aE9Q735 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Ube4aE9Q735 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC21.74■■□□□ 1.07
Ube4aE9Q735 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Ube4aE9Q735 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Ube4aE9Q735 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Ube4aE9Q735 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Ube4aE9Q735 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ube4aE9Q735 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ube4aE9Q735 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Ube4aE9Q735 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ube4aE9Q735 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ube4aE9Q735 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ube4aE9Q735 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ube4aE9Q735 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ube4aE9Q735 Gm7889-201ENSMUST00000185591 958 ntBASIC21.73■■□□□ 1.07
Ube4aE9Q735 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ube4aE9Q735 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ube4aE9Q735 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ube4aE9Q735 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ube4aE9Q735 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ube4aE9Q735 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC21.72■■□□□ 1.07
Ube4aE9Q735 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ube4aE9Q735 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC21.72■■□□□ 1.07
Ube4aE9Q735 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ube4aE9Q735 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ube4aE9Q735 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ube4aE9Q735 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Ube4aE9Q735 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ube4aE9Q735 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ube4aE9Q735 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC21.72■■□□□ 1.07
Ube4aE9Q735 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ube4aE9Q735 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Ube4aE9Q735 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ube4aE9Q735 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ube4aE9Q735 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms