Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim30cD3YVI9 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
Trim30cD3YVI9 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim30cD3YVI9 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim30cD3YVI9 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trim30cD3YVI9 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim30cD3YVI9 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim30cD3YVI9 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.69■□□□□ 0.74
Trim30cD3YVI9 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC19.69■□□□□ 0.74
Trim30cD3YVI9 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Trim30cD3YVI9 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.69■□□□□ 0.74
Trim30cD3YVI9 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
Trim30cD3YVI9 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trim30cD3YVI9 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim30cD3YVI9 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim30cD3YVI9 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim30cD3YVI9 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Trim30cD3YVI9 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Trim30cD3YVI9 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim30cD3YVI9 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.68■□□□□ 0.74
Trim30cD3YVI9 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim30cD3YVI9 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim30cD3YVI9 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim30cD3YVI9 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Trim30cD3YVI9 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim30cD3YVI9 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim30cD3YVI9 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim30cD3YVI9 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Trim30cD3YVI9 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim30cD3YVI9 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim30cD3YVI9 Gm13534-201ENSMUST00000121169 513 ntBASIC19.67■□□□□ 0.74
Trim30cD3YVI9 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim30cD3YVI9 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.67■□□□□ 0.74
Trim30cD3YVI9 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.67■□□□□ 0.74
Trim30cD3YVI9 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Trim30cD3YVI9 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.67■□□□□ 0.74
Trim30cD3YVI9 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim30cD3YVI9 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim30cD3YVI9 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.67■□□□□ 0.74
Trim30cD3YVI9 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim30cD3YVI9 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim30cD3YVI9 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim30cD3YVI9 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim30cD3YVI9 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim30cD3YVI9 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim30cD3YVI9 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
Trim30cD3YVI9 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim30cD3YVI9 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim30cD3YVI9 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Trim30cD3YVI9 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim30cD3YVI9 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim30cD3YVI9 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.66■□□□□ 0.74
Trim30cD3YVI9 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.66■□□□□ 0.74
Trim30cD3YVI9 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim30cD3YVI9 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim30cD3YVI9 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim30cD3YVI9 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim30cD3YVI9 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Trim30cD3YVI9 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim30cD3YVI9 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim30cD3YVI9 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim30cD3YVI9 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Trim30cD3YVI9 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim30cD3YVI9 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Trim30cD3YVI9 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim30cD3YVI9 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.65■□□□□ 0.74
Trim30cD3YVI9 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.65■□□□□ 0.74
Trim30cD3YVI9 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.65■□□□□ 0.74
Trim30cD3YVI9 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Trim30cD3YVI9 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim30cD3YVI9 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim30cD3YVI9 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Trim30cD3YVI9 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim30cD3YVI9 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Trim30cD3YVI9 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Trim30cD3YVI9 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Trim30cD3YVI9 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Trim30cD3YVI9 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.64■□□□□ 0.73
Trim30cD3YVI9 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim30cD3YVI9 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim30cD3YVI9 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trim30cD3YVI9 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Trim30cD3YVI9 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim30cD3YVI9 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim30cD3YVI9 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trim30cD3YVI9 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Trim30cD3YVI9 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trim30cD3YVI9 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Trim30cD3YVI9 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim30cD3YVI9 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim30cD3YVI9 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trim30cD3YVI9 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim30cD3YVI9 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.63■□□□□ 0.73
Trim30cD3YVI9 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Trim30cD3YVI9 Gm29257-201ENSMUST00000186115 639 ntBASIC19.63■□□□□ 0.73
Trim30cD3YVI9 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trim30cD3YVI9 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim30cD3YVI9 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trim30cD3YVI9 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim30cD3YVI9 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms