Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh2d4bA6X942 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh2d4bA6X942 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sh2d4bA6X942 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh2d4bA6X942 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.31■□□□□ 0.68
Sh2d4bA6X942 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh2d4bA6X942 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Sh2d4bA6X942 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh2d4bA6X942 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Sh2d4bA6X942 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh2d4bA6X942 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Sh2d4bA6X942 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.31■□□□□ 0.68
Sh2d4bA6X942 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh2d4bA6X942 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh2d4bA6X942 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh2d4bA6X942 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh2d4bA6X942 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh2d4bA6X942 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Sh2d4bA6X942 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.3■□□□□ 0.68
Sh2d4bA6X942 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh2d4bA6X942 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh2d4bA6X942 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Sh2d4bA6X942 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh2d4bA6X942 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Sh2d4bA6X942 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.29■□□□□ 0.68
Sh2d4bA6X942 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh2d4bA6X942 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.29■□□□□ 0.68
Sh2d4bA6X942 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh2d4bA6X942 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh2d4bA6X942 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh2d4bA6X942 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh2d4bA6X942 Gm6433-201ENSMUST00000118634 875 ntBASIC19.29■□□□□ 0.68
Sh2d4bA6X942 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.29■□□□□ 0.68
Sh2d4bA6X942 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.29■□□□□ 0.68
Sh2d4bA6X942 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh2d4bA6X942 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Sh2d4bA6X942 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh2d4bA6X942 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh2d4bA6X942 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh2d4bA6X942 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh2d4bA6X942 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh2d4bA6X942 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh2d4bA6X942 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Sh2d4bA6X942 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Sh2d4bA6X942 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh2d4bA6X942 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh2d4bA6X942 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh2d4bA6X942 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sh2d4bA6X942 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sh2d4bA6X942 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Sh2d4bA6X942 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh2d4bA6X942 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh2d4bA6X942 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.28■□□□□ 0.68
Sh2d4bA6X942 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
Sh2d4bA6X942 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.28■□□□□ 0.68
Sh2d4bA6X942 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh2d4bA6X942 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh2d4bA6X942 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh2d4bA6X942 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Sh2d4bA6X942 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh2d4bA6X942 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Sh2d4bA6X942 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.28■□□□□ 0.68
Sh2d4bA6X942 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sh2d4bA6X942 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh2d4bA6X942 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sh2d4bA6X942 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh2d4bA6X942 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sh2d4bA6X942 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sh2d4bA6X942 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.27■□□□□ 0.68
Sh2d4bA6X942 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sh2d4bA6X942 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Sh2d4bA6X942 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sh2d4bA6X942 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.27■□□□□ 0.68
Sh2d4bA6X942 Mir5122-201ENSMUST00000175004 89 ntBASIC19.27■□□□□ 0.68
Sh2d4bA6X942 Gm43799-201ENSMUST00000201845 579 ntBASIC19.27■□□□□ 0.68
Sh2d4bA6X942 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sh2d4bA6X942 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sh2d4bA6X942 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sh2d4bA6X942 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Sh2d4bA6X942 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sh2d4bA6X942 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Sh2d4bA6X942 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sh2d4bA6X942 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.27■□□□□ 0.67
Sh2d4bA6X942 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Sh2d4bA6X942 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.26■□□□□ 0.67
Sh2d4bA6X942 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sh2d4bA6X942 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sh2d4bA6X942 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sh2d4bA6X942 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Sh2d4bA6X942 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.26■□□□□ 0.67
Sh2d4bA6X942 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sh2d4bA6X942 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sh2d4bA6X942 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.26■□□□□ 0.67
Sh2d4bA6X942 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sh2d4bA6X942 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sh2d4bA6X942 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sh2d4bA6X942 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh2d4bA6X942 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh2d4bA6X942 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh2d4bA6X942 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms