Protein–RNA interactions for Protein: A3KG49

Gm5640, Predicted gene 5640, mousemouse

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5640A3KG49 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Gm5640A3KG49 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm5640A3KG49 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm5640A3KG49 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm5640A3KG49 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm5640A3KG49 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm5640A3KG49 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm5640A3KG49 Tgds-204ENSMUST00000228543 1594 ntBASIC18.34■□□□□ 0.53
Gm5640A3KG49 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
Gm5640A3KG49 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gm5640A3KG49 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gm5640A3KG49 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm5640A3KG49 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.33■□□□□ 0.52
Gm5640A3KG49 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.33■□□□□ 0.52
Gm5640A3KG49 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
Gm5640A3KG49 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.33■□□□□ 0.52
Gm5640A3KG49 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm5640A3KG49 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Gm5640A3KG49 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm5640A3KG49 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Gm5640A3KG49 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Gm5640A3KG49 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm5640A3KG49 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm5640A3KG49 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm5640A3KG49 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Gm5640A3KG49 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm5640A3KG49 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Gm5640A3KG49 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm5640A3KG49 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm5640A3KG49 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Gm5640A3KG49 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm5640A3KG49 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Gm5640A3KG49 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm5640A3KG49 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Gm5640A3KG49 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Gm5640A3KG49 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm5640A3KG49 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm5640A3KG49 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm5640A3KG49 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm5640A3KG49 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm5640A3KG49 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Gm5640A3KG49 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Gm5640A3KG49 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Gm5640A3KG49 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm5640A3KG49 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm5640A3KG49 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Gm5640A3KG49 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm5640A3KG49 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Gm5640A3KG49 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Gm5640A3KG49 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm5640A3KG49 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm5640A3KG49 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm5640A3KG49 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.3■□□□□ 0.52
Gm5640A3KG49 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Gm5640A3KG49 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm5640A3KG49 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm5640A3KG49 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm5640A3KG49 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Gm5640A3KG49 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm5640A3KG49 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.3■□□□□ 0.52
Gm5640A3KG49 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm5640A3KG49 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.3■□□□□ 0.52
Gm5640A3KG49 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Gm5640A3KG49 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Gm5640A3KG49 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm5640A3KG49 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm5640A3KG49 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Gm5640A3KG49 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.3■□□□□ 0.52
Gm5640A3KG49 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm5640A3KG49 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm5640A3KG49 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm5640A3KG49 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm5640A3KG49 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm5640A3KG49 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm5640A3KG49 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Gm5640A3KG49 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm5640A3KG49 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm5640A3KG49 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.29■□□□□ 0.52
Gm5640A3KG49 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm5640A3KG49 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm5640A3KG49 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm5640A3KG49 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm5640A3KG49 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm5640A3KG49 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Gm5640A3KG49 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Gm5640A3KG49 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Gm5640A3KG49 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm5640A3KG49 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm5640A3KG49 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm5640A3KG49 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Gm5640A3KG49 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Gm5640A3KG49 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm5640A3KG49 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Gm5640A3KG49 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Gm5640A3KG49 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Gm5640A3KG49 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Gm5640A3KG49 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.28■□□□□ 0.52
Gm5640A3KG49 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.28■□□□□ 0.52
Gm5640A3KG49 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Gm5640A3KG49 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms