Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Shroom2A2ALU4 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
Shroom2A2ALU4 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC28.78■■■□□ 2.2
Shroom2A2ALU4 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC28.77■■■□□ 2.2
Shroom2A2ALU4 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Shroom2A2ALU4 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC28.77■■■□□ 2.2
Shroom2A2ALU4 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Shroom2A2ALU4 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC28.77■■■□□ 2.2
Shroom2A2ALU4 Auts2-212ENSMUST00000178555 309 ntBASIC28.77■■■□□ 2.2
Shroom2A2ALU4 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC28.77■■■□□ 2.2
Shroom2A2ALU4 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC28.77■■■□□ 2.2
Shroom2A2ALU4 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Shroom2A2ALU4 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC28.76■■■□□ 2.2
Shroom2A2ALU4 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.2
Shroom2A2ALU4 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC28.76■■■□□ 2.19
Shroom2A2ALU4 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Shroom2A2ALU4 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
Shroom2A2ALU4 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
Shroom2A2ALU4 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Shroom2A2ALU4 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
Shroom2A2ALU4 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC28.75■■■□□ 2.19
Shroom2A2ALU4 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC28.75■■■□□ 2.19
Shroom2A2ALU4 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
Shroom2A2ALU4 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
Shroom2A2ALU4 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC28.75■■■□□ 2.19
Shroom2A2ALU4 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC28.75■■■□□ 2.19
Shroom2A2ALU4 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Shroom2A2ALU4 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC28.74■■■□□ 2.19
Shroom2A2ALU4 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC28.74■■■□□ 2.19
Shroom2A2ALU4 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
Shroom2A2ALU4 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
Shroom2A2ALU4 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC28.74■■■□□ 2.19
Shroom2A2ALU4 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC28.74■■■□□ 2.19
Shroom2A2ALU4 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC28.74■■■□□ 2.19
Shroom2A2ALU4 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Shroom2A2ALU4 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC28.74■■■□□ 2.19
Shroom2A2ALU4 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC28.74■■■□□ 2.19
Shroom2A2ALU4 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
Shroom2A2ALU4 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC28.73■■■□□ 2.19
Shroom2A2ALU4 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC28.73■■■□□ 2.19
Shroom2A2ALU4 Gm2213-201ENSMUST00000197485 688 ntBASIC28.73■■■□□ 2.19
Shroom2A2ALU4 Gm43332-201ENSMUST00000202511 1044 ntBASIC28.73■■■□□ 2.19
Shroom2A2ALU4 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC28.73■■■□□ 2.19
Shroom2A2ALU4 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC28.73■■■□□ 2.19
Shroom2A2ALU4 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Shroom2A2ALU4 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
Shroom2A2ALU4 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Shroom2A2ALU4 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
Shroom2A2ALU4 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
Shroom2A2ALU4 Gm10576-201ENSMUST00000191927 825 ntBASIC28.72■■■□□ 2.19
Shroom2A2ALU4 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Shroom2A2ALU4 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC28.72■■■□□ 2.19
Shroom2A2ALU4 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
Shroom2A2ALU4 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
Shroom2A2ALU4 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Shroom2A2ALU4 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC28.72■■■□□ 2.19
Shroom2A2ALU4 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
Shroom2A2ALU4 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC28.72■■■□□ 2.19
Shroom2A2ALU4 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC28.72■■■□□ 2.19
Shroom2A2ALU4 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC28.72■■■□□ 2.19
Shroom2A2ALU4 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
Shroom2A2ALU4 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
Shroom2A2ALU4 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Shroom2A2ALU4 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Shroom2A2ALU4 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Shroom2A2ALU4 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Shroom2A2ALU4 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC28.71■■■□□ 2.19
Shroom2A2ALU4 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
Shroom2A2ALU4 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Shroom2A2ALU4 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Shroom2A2ALU4 Gm1401-201ENSMUST00000122048 772 ntBASIC28.71■■■□□ 2.19
Shroom2A2ALU4 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC28.71■■■□□ 2.19
Shroom2A2ALU4 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
Shroom2A2ALU4 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
Shroom2A2ALU4 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
Shroom2A2ALU4 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
Shroom2A2ALU4 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Shroom2A2ALU4 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC28.7■■■□□ 2.18
Shroom2A2ALU4 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC28.7■■■□□ 2.18
Shroom2A2ALU4 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC28.7■■■□□ 2.18
Shroom2A2ALU4 Gm45328-201ENSMUST00000210942 917 ntBASIC28.7■■■□□ 2.18
Shroom2A2ALU4 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC28.7■■■□□ 2.18
Shroom2A2ALU4 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC28.7■■■□□ 2.18
Shroom2A2ALU4 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC28.69■■■□□ 2.18
Shroom2A2ALU4 Gm11452-201ENSMUST00000122376 690 ntBASIC28.69■■■□□ 2.18
Shroom2A2ALU4 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Shroom2A2ALU4 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC28.69■■■□□ 2.18
Shroom2A2ALU4 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Shroom2A2ALU4 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Shroom2A2ALU4 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Shroom2A2ALU4 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Shroom2A2ALU4 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Shroom2A2ALU4 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
Shroom2A2ALU4 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC28.68■■■□□ 2.18
Shroom2A2ALU4 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Shroom2A2ALU4 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC28.68■■■□□ 2.18
Shroom2A2ALU4 Mir770-201ENSMUST00000103252 94 ntBASIC28.67■■■□□ 2.18
Shroom2A2ALU4 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC28.67■■■□□ 2.18
Shroom2A2ALU4 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC28.67■■■□□ 2.18
Shroom2A2ALU4 Ighv6-1-201ENSMUST00000193612 343 ntBASIC28.67■■■□□ 2.18
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms