Protein–RNA interactions for Protein: A2A8L1

Chd5, Chromodomain-helicase-DNA-binding protein 5, mousemouse

Predictions only

Length 1,946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd5A2A8L1 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC21.13■□□□□ 0.97
Chd5A2A8L1 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chd5A2A8L1 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chd5A2A8L1 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC21.13■□□□□ 0.97
Chd5A2A8L1 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Chd5A2A8L1 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chd5A2A8L1 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chd5A2A8L1 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Chd5A2A8L1 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chd5A2A8L1 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC21.12■□□□□ 0.97
Chd5A2A8L1 Gm18959-201ENSMUST00000208954 655 ntBASIC21.12■□□□□ 0.97
Chd5A2A8L1 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
Chd5A2A8L1 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Chd5A2A8L1 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Chd5A2A8L1 Notumos-201ENSMUST00000151998 2659 ntBASIC21.12■□□□□ 0.97
Chd5A2A8L1 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chd5A2A8L1 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chd5A2A8L1 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chd5A2A8L1 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC21.12■□□□□ 0.97
Chd5A2A8L1 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Chd5A2A8L1 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chd5A2A8L1 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Chd5A2A8L1 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chd5A2A8L1 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chd5A2A8L1 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Chd5A2A8L1 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chd5A2A8L1 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chd5A2A8L1 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Chd5A2A8L1 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC21.1■□□□□ 0.97
Chd5A2A8L1 Gm4974-201ENSMUST00000209974 875 ntBASIC21.1■□□□□ 0.97
Chd5A2A8L1 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chd5A2A8L1 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Chd5A2A8L1 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chd5A2A8L1 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chd5A2A8L1 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Chd5A2A8L1 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chd5A2A8L1 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Chd5A2A8L1 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Chd5A2A8L1 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chd5A2A8L1 Gm10418-201ENSMUST00000100943 576 ntBASIC21.1■□□□□ 0.97
Chd5A2A8L1 Gm10517-202ENSMUST00000192970 758 ntBASIC21.1■□□□□ 0.97
Chd5A2A8L1 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC21.1■□□□□ 0.97
Chd5A2A8L1 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Chd5A2A8L1 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC21.1■□□□□ 0.97
Chd5A2A8L1 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chd5A2A8L1 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chd5A2A8L1 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chd5A2A8L1 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chd5A2A8L1 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chd5A2A8L1 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chd5A2A8L1 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Chd5A2A8L1 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Chd5A2A8L1 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Chd5A2A8L1 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC21.09■□□□□ 0.97
Chd5A2A8L1 Gm43353-201ENSMUST00000199224 1295 ntBASIC21.09■□□□□ 0.97
Chd5A2A8L1 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chd5A2A8L1 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chd5A2A8L1 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chd5A2A8L1 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chd5A2A8L1 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Chd5A2A8L1 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chd5A2A8L1 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chd5A2A8L1 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC21.08■□□□□ 0.97
Chd5A2A8L1 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC21.08■□□□□ 0.97
Chd5A2A8L1 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chd5A2A8L1 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC21.08■□□□□ 0.97
Chd5A2A8L1 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chd5A2A8L1 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chd5A2A8L1 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC21.08■□□□□ 0.97
Chd5A2A8L1 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Chd5A2A8L1 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Chd5A2A8L1 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Chd5A2A8L1 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC21.08■□□□□ 0.96
Chd5A2A8L1 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Chd5A2A8L1 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Chd5A2A8L1 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Chd5A2A8L1 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chd5A2A8L1 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
Chd5A2A8L1 Gm4217-201ENSMUST00000182243 1002 ntBASIC21.07■□□□□ 0.96
Chd5A2A8L1 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chd5A2A8L1 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chd5A2A8L1 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chd5A2A8L1 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chd5A2A8L1 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chd5A2A8L1 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chd5A2A8L1 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC21.06■□□□□ 0.96
Chd5A2A8L1 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Chd5A2A8L1 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chd5A2A8L1 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
Chd5A2A8L1 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC21.06■□□□□ 0.96
Chd5A2A8L1 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC21.06■□□□□ 0.96
Chd5A2A8L1 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC21.06■□□□□ 0.96
Chd5A2A8L1 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chd5A2A8L1 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chd5A2A8L1 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chd5A2A8L1 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chd5A2A8L1 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Chd5A2A8L1 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC21.04■□□□□ 0.96
Chd5A2A8L1 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
Chd5A2A8L1 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms