Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav12-1A0N8R1 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Trav12-1A0N8R1 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav12-1A0N8R1 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC15.1■□□□□ 0.01
Trav12-1A0N8R1 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav12-1A0N8R1 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav12-1A0N8R1 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav12-1A0N8R1 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav12-1A0N8R1 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
Trav12-1A0N8R1 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav12-1A0N8R1 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
Trav12-1A0N8R1 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav12-1A0N8R1 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav12-1A0N8R1 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav12-1A0N8R1 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav12-1A0N8R1 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav12-1A0N8R1 Gm38345-201ENSMUST00000192635 1748 ntBASIC15.09■□□□□ 0.01
Trav12-1A0N8R1 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC15.09■□□□□ 0.01
Trav12-1A0N8R1 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav12-1A0N8R1 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav12-1A0N8R1 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav12-1A0N8R1 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav12-1A0N8R1 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav12-1A0N8R1 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.09■□□□□ 0.01
Trav12-1A0N8R1 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav12-1A0N8R1 Gm22325-201ENSMUST00000158904 308 ntBASIC15.09■□□□□ 0.01
Trav12-1A0N8R1 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav12-1A0N8R1 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC15.09■□□□□ 0.01
Trav12-1A0N8R1 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav12-1A0N8R1 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav12-1A0N8R1 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Trav12-1A0N8R1 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav12-1A0N8R1 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav12-1A0N8R1 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
Trav12-1A0N8R1 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav12-1A0N8R1 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trav12-1A0N8R1 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav12-1A0N8R1 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav12-1A0N8R1 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav12-1A0N8R1 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav12-1A0N8R1 Gm13234-201ENSMUST00000120010 747 ntBASIC15.08■□□□□ 0
Trav12-1A0N8R1 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC15.08■□□□□ 0
Trav12-1A0N8R1 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav12-1A0N8R1 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav12-1A0N8R1 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav12-1A0N8R1 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav12-1A0N8R1 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
Trav12-1A0N8R1 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav12-1A0N8R1 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav12-1A0N8R1 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav12-1A0N8R1 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav12-1A0N8R1 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav12-1A0N8R1 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC15.07■□□□□ 0
Trav12-1A0N8R1 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav12-1A0N8R1 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav12-1A0N8R1 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav12-1A0N8R1 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Trav12-1A0N8R1 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav12-1A0N8R1 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC15.07■□□□□ 0
Trav12-1A0N8R1 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC15.07■□□□□ 0
Trav12-1A0N8R1 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC15.07■□□□□ 0
Trav12-1A0N8R1 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav12-1A0N8R1 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav12-1A0N8R1 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav12-1A0N8R1 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav12-1A0N8R1 AC131586.2-201ENSMUST00000228370 1512 ntBASIC15.07■□□□□ 0
Trav12-1A0N8R1 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav12-1A0N8R1 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav12-1A0N8R1 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav12-1A0N8R1 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trav12-1A0N8R1 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav12-1A0N8R1 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav12-1A0N8R1 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trav12-1A0N8R1 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav12-1A0N8R1 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav12-1A0N8R1 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav12-1A0N8R1 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav12-1A0N8R1 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav12-1A0N8R1 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav12-1A0N8R1 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trav12-1A0N8R1 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC15.06■□□□□ 0
Trav12-1A0N8R1 Gm2011-201ENSMUST00000203124 1263 ntBASIC15.06■□□□□ 0
Trav12-1A0N8R1 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC15.06■□□□□ 0
Trav12-1A0N8R1 Gm10461-201ENSMUST00000202073 4786 ntBASIC15.06■□□□□ 0
Trav12-1A0N8R1 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav12-1A0N8R1 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav12-1A0N8R1 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav12-1A0N8R1 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav12-1A0N8R1 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav12-1A0N8R1 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav12-1A0N8R1 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav12-1A0N8R1 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav12-1A0N8R1 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav12-1A0N8R1 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav12-1A0N8R1 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Trav12-1A0N8R1 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.05■□□□□ 0
Trav12-1A0N8R1 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav12-1A0N8R1 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav12-1A0N8R1 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
Trav12-1A0N8R1 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms