Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc112A0AUP1 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC20.63■□□□□ 0.89
Ccdc112A0AUP1 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc112A0AUP1 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC20.63■□□□□ 0.89
Ccdc112A0AUP1 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.63■□□□□ 0.89
Ccdc112A0AUP1 Gm6420-201ENSMUST00000193885 723 ntBASIC20.63■□□□□ 0.89
Ccdc112A0AUP1 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Ccdc112A0AUP1 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Ccdc112A0AUP1 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc112A0AUP1 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc112A0AUP1 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc112A0AUP1 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc112A0AUP1 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc112A0AUP1 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc112A0AUP1 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Ccdc112A0AUP1 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc112A0AUP1 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc112A0AUP1 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc112A0AUP1 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Ccdc112A0AUP1 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc112A0AUP1 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc112A0AUP1 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
Ccdc112A0AUP1 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc112A0AUP1 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc112A0AUP1 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Ccdc112A0AUP1 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
Ccdc112A0AUP1 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc112A0AUP1 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Ccdc112A0AUP1 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc112A0AUP1 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.61■□□□□ 0.89
Ccdc112A0AUP1 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc112A0AUP1 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.61■□□□□ 0.89
Ccdc112A0AUP1 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.61■□□□□ 0.89
Ccdc112A0AUP1 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.61■□□□□ 0.89
Ccdc112A0AUP1 Gm37374-201ENSMUST00000194954 1829 ntBASIC20.61■□□□□ 0.89
Ccdc112A0AUP1 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc112A0AUP1 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Ccdc112A0AUP1 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
Ccdc112A0AUP1 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc112A0AUP1 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc112A0AUP1 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc112A0AUP1 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc112A0AUP1 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc112A0AUP1 Nespas-201ENSMUST00000143738 1083 ntBASIC20.6■□□□□ 0.89
Ccdc112A0AUP1 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc112A0AUP1 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc112A0AUP1 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc112A0AUP1 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.6■□□□□ 0.89
Ccdc112A0AUP1 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc112A0AUP1 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc112A0AUP1 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc112A0AUP1 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc112A0AUP1 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc112A0AUP1 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc112A0AUP1 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc112A0AUP1 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Ccdc112A0AUP1 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC20.59■□□□□ 0.89
Ccdc112A0AUP1 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc112A0AUP1 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc112A0AUP1 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc112A0AUP1 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc112A0AUP1 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc112A0AUP1 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc112A0AUP1 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc112A0AUP1 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc112A0AUP1 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Ccdc112A0AUP1 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC20.59■□□□□ 0.89
Ccdc112A0AUP1 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc112A0AUP1 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
Ccdc112A0AUP1 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc112A0AUP1 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.58■□□□□ 0.89
Ccdc112A0AUP1 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.58■□□□□ 0.89
Ccdc112A0AUP1 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.58■□□□□ 0.89
Ccdc112A0AUP1 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.58■□□□□ 0.89
Ccdc112A0AUP1 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc112A0AUP1 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc112A0AUP1 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ccdc112A0AUP1 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ccdc112A0AUP1 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.88
Ccdc112A0AUP1 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ccdc112A0AUP1 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Ccdc112A0AUP1 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc112A0AUP1 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC20.57■□□□□ 0.88
Ccdc112A0AUP1 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc112A0AUP1 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc112A0AUP1 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc112A0AUP1 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC20.56■□□□□ 0.88
Ccdc112A0AUP1 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc112A0AUP1 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC20.56■□□□□ 0.88
Ccdc112A0AUP1 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc112A0AUP1 AC122335.2-201ENSMUST00000213901 6181 ntBASIC20.56■□□□□ 0.88
Ccdc112A0AUP1 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc112A0AUP1 Gm8969-201ENSMUST00000199694 526 ntBASIC20.56■□□□□ 0.88
Ccdc112A0AUP1 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
Ccdc112A0AUP1 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.56■□□□□ 0.88
Ccdc112A0AUP1 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.56■□□□□ 0.88
Ccdc112A0AUP1 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
Ccdc112A0AUP1 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Ccdc112A0AUP1 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc112A0AUP1 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms