Protein–RNA interactions for Protein: A0A1B0GSW2

Gm28729, Predicted gene 28729, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28729A0A1B0GSW2 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm28729A0A1B0GSW2 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm28729A0A1B0GSW2 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm28729A0A1B0GSW2 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm28729A0A1B0GSW2 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm28729A0A1B0GSW2 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm28729A0A1B0GSW2 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm28729A0A1B0GSW2 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.69■□□□□ 0.42
Gm28729A0A1B0GSW2 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm28729A0A1B0GSW2 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.69■□□□□ 0.42
Gm28729A0A1B0GSW2 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm28729A0A1B0GSW2 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.69■□□□□ 0.42
Gm28729A0A1B0GSW2 Gm7889-201ENSMUST00000185591 958 ntBASIC17.69■□□□□ 0.42
Gm28729A0A1B0GSW2 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.69■□□□□ 0.42
Gm28729A0A1B0GSW2 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm28729A0A1B0GSW2 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm28729A0A1B0GSW2 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Gm28729A0A1B0GSW2 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gm28729A0A1B0GSW2 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm28729A0A1B0GSW2 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28729A0A1B0GSW2 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28729A0A1B0GSW2 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28729A0A1B0GSW2 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28729A0A1B0GSW2 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28729A0A1B0GSW2 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28729A0A1B0GSW2 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28729A0A1B0GSW2 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28729A0A1B0GSW2 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28729A0A1B0GSW2 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28729A0A1B0GSW2 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gm28729A0A1B0GSW2 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Gm28729A0A1B0GSW2 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.68■□□□□ 0.42
Gm28729A0A1B0GSW2 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gm28729A0A1B0GSW2 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Gm28729A0A1B0GSW2 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gm28729A0A1B0GSW2 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm28729A0A1B0GSW2 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Gm28729A0A1B0GSW2 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm28729A0A1B0GSW2 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm28729A0A1B0GSW2 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm28729A0A1B0GSW2 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm28729A0A1B0GSW2 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm28729A0A1B0GSW2 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.66■□□□□ 0.42
Gm28729A0A1B0GSW2 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm28729A0A1B0GSW2 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Gm28729A0A1B0GSW2 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Gm28729A0A1B0GSW2 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm28729A0A1B0GSW2 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.66■□□□□ 0.42
Gm28729A0A1B0GSW2 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Gm28729A0A1B0GSW2 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm28729A0A1B0GSW2 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm28729A0A1B0GSW2 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.66■□□□□ 0.42
Gm28729A0A1B0GSW2 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Gm28729A0A1B0GSW2 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm28729A0A1B0GSW2 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm28729A0A1B0GSW2 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm28729A0A1B0GSW2 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm28729A0A1B0GSW2 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm28729A0A1B0GSW2 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm28729A0A1B0GSW2 Gm12085-201ENSMUST00000119263 940 ntBASIC17.65■□□□□ 0.42
Gm28729A0A1B0GSW2 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.65■□□□□ 0.42
Gm28729A0A1B0GSW2 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Gm28729A0A1B0GSW2 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.65■□□□□ 0.42
Gm28729A0A1B0GSW2 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.65■□□□□ 0.42
Gm28729A0A1B0GSW2 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm28729A0A1B0GSW2 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm28729A0A1B0GSW2 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.65■□□□□ 0.42
Gm28729A0A1B0GSW2 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm28729A0A1B0GSW2 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm28729A0A1B0GSW2 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Gm28729A0A1B0GSW2 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm28729A0A1B0GSW2 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Gm28729A0A1B0GSW2 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Gm28729A0A1B0GSW2 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Gm28729A0A1B0GSW2 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Gm28729A0A1B0GSW2 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm28729A0A1B0GSW2 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm28729A0A1B0GSW2 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm28729A0A1B0GSW2 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Gm28729A0A1B0GSW2 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.64■□□□□ 0.41
Gm28729A0A1B0GSW2 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Gm28729A0A1B0GSW2 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm28729A0A1B0GSW2 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Gm28729A0A1B0GSW2 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.64■□□□□ 0.41
Gm28729A0A1B0GSW2 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28729A0A1B0GSW2 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28729A0A1B0GSW2 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28729A0A1B0GSW2 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.63■□□□□ 0.41
Gm28729A0A1B0GSW2 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.63■□□□□ 0.41
Gm28729A0A1B0GSW2 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28729A0A1B0GSW2 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28729A0A1B0GSW2 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Gm28729A0A1B0GSW2 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.63■□□□□ 0.41
Gm28729A0A1B0GSW2 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.63■□□□□ 0.41
Gm28729A0A1B0GSW2 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28729A0A1B0GSW2 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.63■□□□□ 0.41
Gm28729A0A1B0GSW2 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.63■□□□□ 0.41
Gm28729A0A1B0GSW2 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28729A0A1B0GSW2 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.63■□□□□ 0.41
Gm28729A0A1B0GSW2 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms