Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Gm3880A0A1B0GSB3 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Gm3880A0A1B0GSB3 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Gm3880A0A1B0GSB3 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC9.02□□□□□ -0.97
Gm3880A0A1B0GSB3 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC9.02□□□□□ -0.97
Gm3880A0A1B0GSB3 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Gm3880A0A1B0GSB3 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Gm3880A0A1B0GSB3 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Gm3880A0A1B0GSB3 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Gm3880A0A1B0GSB3 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Gm3880A0A1B0GSB3 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC9.02□□□□□ -0.97
Gm3880A0A1B0GSB3 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Gm3880A0A1B0GSB3 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Gm3880A0A1B0GSB3 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Gm3880A0A1B0GSB3 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Gm3880A0A1B0GSB3 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Gm3880A0A1B0GSB3 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Gm3880A0A1B0GSB3 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm3880A0A1B0GSB3 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm3880A0A1B0GSB3 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Gm3880A0A1B0GSB3 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC9.01□□□□□ -0.97
Gm3880A0A1B0GSB3 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm3880A0A1B0GSB3 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm3880A0A1B0GSB3 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm3880A0A1B0GSB3 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Gm3880A0A1B0GSB3 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm3880A0A1B0GSB3 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC9.01□□□□□ -0.97
Gm3880A0A1B0GSB3 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm3880A0A1B0GSB3 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm3880A0A1B0GSB3 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm3880A0A1B0GSB3 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm3880A0A1B0GSB3 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm3880A0A1B0GSB3 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm3880A0A1B0GSB3 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm3880A0A1B0GSB3 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm3880A0A1B0GSB3 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm3880A0A1B0GSB3 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC9.01□□□□□ -0.97
Gm3880A0A1B0GSB3 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Gm3880A0A1B0GSB3 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm3880A0A1B0GSB3 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC9.01□□□□□ -0.97
Gm3880A0A1B0GSB3 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Gm3880A0A1B0GSB3 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm3880A0A1B0GSB3 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm3880A0A1B0GSB3 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Gm3880A0A1B0GSB3 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC9□□□□□ -0.97
Gm3880A0A1B0GSB3 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC9□□□□□ -0.97
Gm3880A0A1B0GSB3 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC9□□□□□ -0.97
Gm3880A0A1B0GSB3 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Gm3880A0A1B0GSB3 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Gm3880A0A1B0GSB3 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Gm3880A0A1B0GSB3 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Gm3880A0A1B0GSB3 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC9□□□□□ -0.97
Gm3880A0A1B0GSB3 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Gm3880A0A1B0GSB3 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC9□□□□□ -0.97
Gm3880A0A1B0GSB3 Gm43338-201ENSMUST00000198617 2223 ntBASIC9□□□□□ -0.97
Gm3880A0A1B0GSB3 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC9□□□□□ -0.97
Gm3880A0A1B0GSB3 Gm42918-201ENSMUST00000199249 1580 ntBASIC9□□□□□ -0.97
Gm3880A0A1B0GSB3 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Gm3880A0A1B0GSB3 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Gm3880A0A1B0GSB3 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC9□□□□□ -0.97
Gm3880A0A1B0GSB3 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Gm3880A0A1B0GSB3 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC9□□□□□ -0.97
Gm3880A0A1B0GSB3 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC9□□□□□ -0.97
Gm3880A0A1B0GSB3 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Gm3880A0A1B0GSB3 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Gm3880A0A1B0GSB3 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Gm3880A0A1B0GSB3 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Gm3880A0A1B0GSB3 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Gm3880A0A1B0GSB3 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Gm3880A0A1B0GSB3 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC9□□□□□ -0.97
Gm3880A0A1B0GSB3 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Gm3880A0A1B0GSB3 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Gm3880A0A1B0GSB3 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC9□□□□□ -0.97
Gm3880A0A1B0GSB3 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Gm3880A0A1B0GSB3 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Gm3880A0A1B0GSB3 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Gm3880A0A1B0GSB3 Dancr-204ENSMUST00000132389 2347 ntBASIC8.99□□□□□ -0.97
Gm3880A0A1B0GSB3 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Gm3880A0A1B0GSB3 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC8.99□□□□□ -0.97
Gm3880A0A1B0GSB3 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Gm3880A0A1B0GSB3 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Gm3880A0A1B0GSB3 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Gm3880A0A1B0GSB3 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Gm3880A0A1B0GSB3 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Gm3880A0A1B0GSB3 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Gm3880A0A1B0GSB3 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC8.99□□□□□ -0.97
Gm3880A0A1B0GSB3 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Gm3880A0A1B0GSB3 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Gm3880A0A1B0GSB3 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC8.99□□□□□ -0.97
Gm3880A0A1B0GSB3 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Gm3880A0A1B0GSB3 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Gm3880A0A1B0GSB3 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Gm3880A0A1B0GSB3 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Gm3880A0A1B0GSB3 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Gm3880A0A1B0GSB3 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Gm3880A0A1B0GSB3 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Gm3880A0A1B0GSB3 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC8.99□□□□□ -0.97
Gm3880A0A1B0GSB3 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Gm3880A0A1B0GSB3 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Gm3880A0A1B0GSB3 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC8.98□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms