Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv17A0A140T8P8 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC13.87□□□□□ -0.19
Trbv17A0A140T8P8 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv17A0A140T8P8 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv17A0A140T8P8 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trbv17A0A140T8P8 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv17A0A140T8P8 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trbv17A0A140T8P8 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv17A0A140T8P8 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC13.87□□□□□ -0.19
Trbv17A0A140T8P8 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv17A0A140T8P8 Gm27405-201ENSMUST00000184201 112 ntBASIC13.87□□□□□ -0.19
Trbv17A0A140T8P8 Gm6365-201ENSMUST00000054711 744 ntBASIC13.87□□□□□ -0.19
Trbv17A0A140T8P8 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trbv17A0A140T8P8 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv17A0A140T8P8 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv17A0A140T8P8 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv17A0A140T8P8 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv17A0A140T8P8 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv17A0A140T8P8 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Trbv17A0A140T8P8 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv17A0A140T8P8 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv17A0A140T8P8 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv17A0A140T8P8 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv17A0A140T8P8 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv17A0A140T8P8 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv17A0A140T8P8 Gm7291-201ENSMUST00000199147 382 ntBASIC13.86□□□□□ -0.19
Trbv17A0A140T8P8 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC13.86□□□□□ -0.19
Trbv17A0A140T8P8 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv17A0A140T8P8 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv17A0A140T8P8 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trbv17A0A140T8P8 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv17A0A140T8P8 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv17A0A140T8P8 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trbv17A0A140T8P8 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv17A0A140T8P8 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv17A0A140T8P8 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Trbv17A0A140T8P8 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv17A0A140T8P8 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv17A0A140T8P8 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trbv17A0A140T8P8 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC13.85□□□□□ -0.19
Trbv17A0A140T8P8 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv17A0A140T8P8 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv17A0A140T8P8 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv17A0A140T8P8 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv17A0A140T8P8 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv17A0A140T8P8 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trbv17A0A140T8P8 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv17A0A140T8P8 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv17A0A140T8P8 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv17A0A140T8P8 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv17A0A140T8P8 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbv17A0A140T8P8 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Trbv17A0A140T8P8 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv17A0A140T8P8 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC13.84□□□□□ -0.19
Trbv17A0A140T8P8 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trbv17A0A140T8P8 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trbv17A0A140T8P8 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv17A0A140T8P8 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC13.84□□□□□ -0.19
Trbv17A0A140T8P8 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC13.84□□□□□ -0.19
Trbv17A0A140T8P8 AC160393.1-201ENSMUST00000218378 1279 ntBASIC13.84□□□□□ -0.19
Trbv17A0A140T8P8 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv17A0A140T8P8 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv17A0A140T8P8 Gm15853-202ENSMUST00000195518 2041 ntBASIC13.84□□□□□ -0.19
Trbv17A0A140T8P8 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trbv17A0A140T8P8 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Trbv17A0A140T8P8 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv17A0A140T8P8 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv17A0A140T8P8 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv17A0A140T8P8 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Trbv17A0A140T8P8 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv17A0A140T8P8 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv17A0A140T8P8 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv17A0A140T8P8 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv17A0A140T8P8 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv17A0A140T8P8 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC13.84□□□□□ -0.19
Trbv17A0A140T8P8 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv17A0A140T8P8 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trbv17A0A140T8P8 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trbv17A0A140T8P8 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv17A0A140T8P8 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv17A0A140T8P8 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv17A0A140T8P8 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv17A0A140T8P8 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC13.83□□□□□ -0.2
Trbv17A0A140T8P8 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv17A0A140T8P8 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv17A0A140T8P8 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC13.83□□□□□ -0.2
Trbv17A0A140T8P8 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trbv17A0A140T8P8 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv17A0A140T8P8 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC13.83□□□□□ -0.2
Trbv17A0A140T8P8 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv17A0A140T8P8 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv17A0A140T8P8 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv17A0A140T8P8 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv17A0A140T8P8 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv17A0A140T8P8 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv17A0A140T8P8 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv17A0A140T8P8 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv17A0A140T8P8 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv17A0A140T8P8 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv17A0A140T8P8 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms