Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Igkv1-88A0A140T8N1 Gm42922-201ENSMUST00000195887 2078 ntBASIC11.96□□□□□ -0.49
Igkv1-88A0A140T8N1 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Igkv1-88A0A140T8N1 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC11.96□□□□□ -0.49
Igkv1-88A0A140T8N1 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Igkv1-88A0A140T8N1 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Igkv1-88A0A140T8N1 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Igkv1-88A0A140T8N1 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Igkv1-88A0A140T8N1 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Igkv1-88A0A140T8N1 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Igkv1-88A0A140T8N1 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC11.96□□□□□ -0.49
Igkv1-88A0A140T8N1 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC11.96□□□□□ -0.49
Igkv1-88A0A140T8N1 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Igkv1-88A0A140T8N1 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Igkv1-88A0A140T8N1 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Igkv1-88A0A140T8N1 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Igkv1-88A0A140T8N1 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC11.96□□□□□ -0.5
Igkv1-88A0A140T8N1 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Igkv1-88A0A140T8N1 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Igkv1-88A0A140T8N1 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Igkv1-88A0A140T8N1 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Igkv1-88A0A140T8N1 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Igkv1-88A0A140T8N1 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Igkv1-88A0A140T8N1 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Igkv1-88A0A140T8N1 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Igkv1-88A0A140T8N1 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Igkv1-88A0A140T8N1 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Igkv1-88A0A140T8N1 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Igkv1-88A0A140T8N1 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Igkv1-88A0A140T8N1 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Igkv1-88A0A140T8N1 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Igkv1-88A0A140T8N1 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC11.95□□□□□ -0.5
Igkv1-88A0A140T8N1 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC11.95□□□□□ -0.5
Igkv1-88A0A140T8N1 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC11.95□□□□□ -0.5
Igkv1-88A0A140T8N1 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Igkv1-88A0A140T8N1 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Igkv1-88A0A140T8N1 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Igkv1-88A0A140T8N1 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Igkv1-88A0A140T8N1 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Igkv1-88A0A140T8N1 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Igkv1-88A0A140T8N1 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Igkv1-88A0A140T8N1 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Igkv1-88A0A140T8N1 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Igkv1-88A0A140T8N1 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Igkv1-88A0A140T8N1 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Igkv1-88A0A140T8N1 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Igkv1-88A0A140T8N1 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Igkv1-88A0A140T8N1 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Igkv1-88A0A140T8N1 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Igkv1-88A0A140T8N1 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Igkv1-88A0A140T8N1 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Igkv1-88A0A140T8N1 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC11.94□□□□□ -0.5
Igkv1-88A0A140T8N1 Gm42900-201ENSMUST00000197184 2167 ntBASIC11.94□□□□□ -0.5
Igkv1-88A0A140T8N1 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Igkv1-88A0A140T8N1 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Igkv1-88A0A140T8N1 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Igkv1-88A0A140T8N1 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Igkv1-88A0A140T8N1 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Igkv1-88A0A140T8N1 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Igkv1-88A0A140T8N1 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC11.94□□□□□ -0.5
Igkv1-88A0A140T8N1 Gm12251-201ENSMUST00000117893 792 ntBASIC11.94□□□□□ -0.5
Igkv1-88A0A140T8N1 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC11.94□□□□□ -0.5
Igkv1-88A0A140T8N1 Flvcr1-202ENSMUST00000191946 1216 ntBASIC11.94□□□□□ -0.5
Igkv1-88A0A140T8N1 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Igkv1-88A0A140T8N1 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Igkv1-88A0A140T8N1 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Igkv1-88A0A140T8N1 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Igkv1-88A0A140T8N1 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Igkv1-88A0A140T8N1 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Igkv1-88A0A140T8N1 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Igkv1-88A0A140T8N1 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Igkv1-88A0A140T8N1 Gm7856-201ENSMUST00000117514 1493 ntBASIC11.94□□□□□ -0.5
Igkv1-88A0A140T8N1 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Igkv1-88A0A140T8N1 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Igkv1-88A0A140T8N1 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Igkv1-88A0A140T8N1 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Igkv1-88A0A140T8N1 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Igkv1-88A0A140T8N1 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Igkv1-88A0A140T8N1 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Igkv1-88A0A140T8N1 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC11.93□□□□□ -0.5
Igkv1-88A0A140T8N1 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Igkv1-88A0A140T8N1 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Igkv1-88A0A140T8N1 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Igkv1-88A0A140T8N1 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Igkv1-88A0A140T8N1 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Igkv1-88A0A140T8N1 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Igkv1-88A0A140T8N1 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Igkv1-88A0A140T8N1 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Igkv1-88A0A140T8N1 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Igkv1-88A0A140T8N1 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Igkv1-88A0A140T8N1 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Igkv1-88A0A140T8N1 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Igkv1-88A0A140T8N1 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Igkv1-88A0A140T8N1 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Igkv1-88A0A140T8N1 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Igkv1-88A0A140T8N1 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC11.92□□□□□ -0.5
Igkv1-88A0A140T8N1 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC11.92□□□□□ -0.5
Igkv1-88A0A140T8N1 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Igkv1-88A0A140T8N1 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Igkv1-88A0A140T8N1 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms