Protein–RNA interactions for Protein: A0A0G2JGB9

Trdv2-1, T cell receptor delta variable 2-1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-1A0A0G2JGB9 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC13.31□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Gm43338-201ENSMUST00000198617 2223 ntBASIC13.31□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdv2-1A0A0G2JGB9 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Gm8969-201ENSMUST00000199694 526 ntBASIC13.3□□□□□ -0.28
Trdv2-1A0A0G2JGB9 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC13.3□□□□□ -0.28
Trdv2-1A0A0G2JGB9 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC13.3□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC13.29□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC13.29□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trdv2-1A0A0G2JGB9 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Gm32699-201ENSMUST00000221728 1988 ntBASIC13.29□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Cap2-205ENSMUST00000225824 1634 ntBASIC13.28□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Gm10657-201ENSMUST00000193528 1031 ntBASIC13.28□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC13.28□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC13.28□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trdv2-1A0A0G2JGB9 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.27□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trdv2-1A0A0G2JGB9 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trdv2-1A0A0G2JGB9 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC13.27□□□□□ -0.29
Trdv2-1A0A0G2JGB9 Gm18755-201ENSMUST00000218030 1099 ntBASIC13.27□□□□□ -0.29
Trdv2-1A0A0G2JGB9 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trdv2-1A0A0G2JGB9 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trdv2-1A0A0G2JGB9 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trdv2-1A0A0G2JGB9 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Trdv2-1A0A0G2JGB9 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Trdv2-1A0A0G2JGB9 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trdv2-1A0A0G2JGB9 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trdv2-1A0A0G2JGB9 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC13.27□□□□□ -0.29
Trdv2-1A0A0G2JGB9 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trdv2-1A0A0G2JGB9 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trdv2-1A0A0G2JGB9 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trdv2-1A0A0G2JGB9 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trdv2-1A0A0G2JGB9 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trdv2-1A0A0G2JGB9 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trdv2-1A0A0G2JGB9 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trdv2-1A0A0G2JGB9 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms