Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Atg4a-psA0A0G2JFS9 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Atg4a-psA0A0G2JFS9 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Atg4a-psA0A0G2JFS9 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Atg4a-psA0A0G2JFS9 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Atg4a-psA0A0G2JFS9 Dio3-201ENSMUST00000097228 1449 ntBASIC22.03■■□□□ 1.12
Atg4a-psA0A0G2JFS9 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Atg4a-psA0A0G2JFS9 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Atg4a-psA0A0G2JFS9 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Atg4a-psA0A0G2JFS9 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Atg4a-psA0A0G2JFS9 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Atg4a-psA0A0G2JFS9 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Atg4a-psA0A0G2JFS9 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Atg4a-psA0A0G2JFS9 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Atg4a-psA0A0G2JFS9 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC22.02■■□□□ 1.12
Atg4a-psA0A0G2JFS9 Gm11927-201ENSMUST00000118472 759 ntBASIC22.02■■□□□ 1.12
Atg4a-psA0A0G2JFS9 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC22.02■■□□□ 1.12
Atg4a-psA0A0G2JFS9 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Atg4a-psA0A0G2JFS9 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Atg4a-psA0A0G2JFS9 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC22.02■■□□□ 1.12
Atg4a-psA0A0G2JFS9 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Atg4a-psA0A0G2JFS9 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC22.01■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Atg4a-psA0A0G2JFS9 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC22■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Gm12441-201ENSMUST00000121806 588 ntBASIC22■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC22■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC22■■□□□ 1.11
Atg4a-psA0A0G2JFS9 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC22■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Flg-201ENSMUST00000050758 1488 ntBASIC22■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Gm12896-201ENSMUST00000118430 226 ntBASIC21.99■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Gm15847-201ENSMUST00000121417 1065 ntBASIC21.99■■□□□ 1.11
Atg4a-psA0A0G2JFS9 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC21.99■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Atg4a-psA0A0G2JFS9 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC21.98■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Gm12527-201ENSMUST00000117967 564 ntBASIC21.98■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC21.98■■□□□ 1.11
Atg4a-psA0A0G2JFS9 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Gm2559-201ENSMUST00000201323 363 ntBASIC21.98■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Gm20049-201ENSMUST00000219950 730 ntBASIC21.98■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Mtag2-201ENSMUST00000058665 714 ntBASIC21.98■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Atg4a-psA0A0G2JFS9 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC21.96■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.11
Atg4a-psA0A0G2JFS9 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
Atg4a-psA0A0G2JFS9 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Atg4a-psA0A0G2JFS9 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Atg4a-psA0A0G2JFS9 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Atg4a-psA0A0G2JFS9 Gm11249-201ENSMUST00000117071 859 ntBASIC21.95■■□□□ 1.1
Atg4a-psA0A0G2JFS9 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC21.95■■□□□ 1.1
Atg4a-psA0A0G2JFS9 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
Atg4a-psA0A0G2JFS9 CT025689.6-201ENSMUST00000224991 1104 ntBASIC21.95■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms