Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13n-2A0A0G2JF93 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav13n-2A0A0G2JF93 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Trav13n-2A0A0G2JF93 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13n-2A0A0G2JF93 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13n-2A0A0G2JF93 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13n-2A0A0G2JF93 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13n-2A0A0G2JF93 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC11.99□□□□□ -0.49
Trav13n-2A0A0G2JF93 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13n-2A0A0G2JF93 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13n-2A0A0G2JF93 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13n-2A0A0G2JF93 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13n-2A0A0G2JF93 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13n-2A0A0G2JF93 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13n-2A0A0G2JF93 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13n-2A0A0G2JF93 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13n-2A0A0G2JF93 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13n-2A0A0G2JF93 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13n-2A0A0G2JF93 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13n-2A0A0G2JF93 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13n-2A0A0G2JF93 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trav13n-2A0A0G2JF93 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav13n-2A0A0G2JF93 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13n-2A0A0G2JF93 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav13n-2A0A0G2JF93 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13n-2A0A0G2JF93 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Trav13n-2A0A0G2JF93 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13n-2A0A0G2JF93 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13n-2A0A0G2JF93 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13n-2A0A0G2JF93 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav13n-2A0A0G2JF93 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav13n-2A0A0G2JF93 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13n-2A0A0G2JF93 Gm37194-201ENSMUST00000193092 3031 ntBASIC11.97□□□□□ -0.49
Trav13n-2A0A0G2JF93 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13n-2A0A0G2JF93 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13n-2A0A0G2JF93 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13n-2A0A0G2JF93 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13n-2A0A0G2JF93 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13n-2A0A0G2JF93 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13n-2A0A0G2JF93 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13n-2A0A0G2JF93 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13n-2A0A0G2JF93 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trav13n-2A0A0G2JF93 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Trav13n-2A0A0G2JF93 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13n-2A0A0G2JF93 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13n-2A0A0G2JF93 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13n-2A0A0G2JF93 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13n-2A0A0G2JF93 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Trav13n-2A0A0G2JF93 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13n-2A0A0G2JF93 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC11.97□□□□□ -0.49
Trav13n-2A0A0G2JF93 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav13n-2A0A0G2JF93 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13n-2A0A0G2JF93 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13n-2A0A0G2JF93 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13n-2A0A0G2JF93 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13n-2A0A0G2JF93 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13n-2A0A0G2JF93 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13n-2A0A0G2JF93 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13n-2A0A0G2JF93 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13n-2A0A0G2JF93 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13n-2A0A0G2JF93 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Trav13n-2A0A0G2JF93 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC11.96□□□□□ -0.49
Trav13n-2A0A0G2JF93 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC11.96□□□□□ -0.49
Trav13n-2A0A0G2JF93 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13n-2A0A0G2JF93 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13n-2A0A0G2JF93 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13n-2A0A0G2JF93 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13n-2A0A0G2JF93 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav13n-2A0A0G2JF93 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC11.96□□□□□ -0.5
Trav13n-2A0A0G2JF93 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trav13n-2A0A0G2JF93 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trav13n-2A0A0G2JF93 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav13n-2A0A0G2JF93 Gm43294-201ENSMUST00000202850 2490 ntBASIC11.96□□□□□ -0.5
Trav13n-2A0A0G2JF93 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav13n-2A0A0G2JF93 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav13n-2A0A0G2JF93 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav13n-2A0A0G2JF93 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav13n-2A0A0G2JF93 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13n-2A0A0G2JF93 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13n-2A0A0G2JF93 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13n-2A0A0G2JF93 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13n-2A0A0G2JF93 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13n-2A0A0G2JF93 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13n-2A0A0G2JF93 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13n-2A0A0G2JF93 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13n-2A0A0G2JF93 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13n-2A0A0G2JF93 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13n-2A0A0G2JF93 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13n-2A0A0G2JF93 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13n-2A0A0G2JF93 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC11.95□□□□□ -0.5
Trav13n-2A0A0G2JF93 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trav13n-2A0A0G2JF93 Serp2-204ENSMUST00000228055 705 ntBASIC11.95□□□□□ -0.5
Trav13n-2A0A0G2JF93 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13n-2A0A0G2JF93 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trav13n-2A0A0G2JF93 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13n-2A0A0G2JF93 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13n-2A0A0G2JF93 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13n-2A0A0G2JF93 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav13n-2A0A0G2JF93 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13n-2A0A0G2JF93 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms