Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav13n-1A0A0G2JEU8 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC13.08□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Rncr4-201ENSMUST00000194541 2234 ntBASIC13.08□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trav13n-1A0A0G2JEU8 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Gm5953-201ENSMUST00000220644 2616 ntBASIC13.08□□□□□ -0.32
Trav13n-1A0A0G2JEU8 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC13.08□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Gm20049-201ENSMUST00000219950 730 ntBASIC13.08□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Gm35558-201ENSMUST00000222675 2219 ntBASIC13.07□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC13.07□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Gm12527-201ENSMUST00000117967 564 ntBASIC13.07□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC13.07□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13n-1A0A0G2JEU8 AC160393.1-201ENSMUST00000218378 1279 ntBASIC13.07□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trav13n-1A0A0G2JEU8 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC13.07□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC13.06□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13n-1A0A0G2JEU8 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Gm10167-201ENSMUST00000150411 1479 ntBASIC13.05□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC13.05□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Trmt13-210ENSMUST00000198454 880 ntBASIC13.05□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC13.05□□□□□ -0.32
Trav13n-1A0A0G2JEU8 AC135637.1-201ENSMUST00000227750 365 ntBASIC13.05□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Grk6-206ENSMUST00000224995 2971 ntBASIC13.05□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-1A0A0G2JEU8 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms