Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trav9-4A0A0B4J1K2 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav9-4A0A0B4J1K2 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav9-4A0A0B4J1K2 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav9-4A0A0B4J1K2 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav9-4A0A0B4J1K2 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC13.57□□□□□ -0.24
Trav9-4A0A0B4J1K2 Rab3c-203ENSMUST00000224180 967 ntBASIC13.57□□□□□ -0.24
Trav9-4A0A0B4J1K2 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC13.57□□□□□ -0.24
Trav9-4A0A0B4J1K2 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav9-4A0A0B4J1K2 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav9-4A0A0B4J1K2 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav9-4A0A0B4J1K2 Gm43213-201ENSMUST00000151866 1790 ntBASIC13.57□□□□□ -0.24
Trav9-4A0A0B4J1K2 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav9-4A0A0B4J1K2 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav9-4A0A0B4J1K2 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC13.57□□□□□ -0.24
Trav9-4A0A0B4J1K2 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav9-4A0A0B4J1K2 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav9-4A0A0B4J1K2 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav9-4A0A0B4J1K2 Shroom3-211ENSMUST00000225438 5742 ntBASIC13.56□□□□□ -0.24
Trav9-4A0A0B4J1K2 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav9-4A0A0B4J1K2 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav9-4A0A0B4J1K2 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav9-4A0A0B4J1K2 Gm38308-201ENSMUST00000194934 1809 ntBASIC13.56□□□□□ -0.24
Trav9-4A0A0B4J1K2 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav9-4A0A0B4J1K2 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav9-4A0A0B4J1K2 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC13.56□□□□□ -0.24
Trav9-4A0A0B4J1K2 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC13.56□□□□□ -0.24
Trav9-4A0A0B4J1K2 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trav9-4A0A0B4J1K2 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC13.56□□□□□ -0.24
Trav9-4A0A0B4J1K2 AC140264.2-202ENSMUST00000218746 817 ntBASIC13.56□□□□□ -0.24
Trav9-4A0A0B4J1K2 AC122769.4-201ENSMUST00000228166 901 ntBASIC13.56□□□□□ -0.24
Trav9-4A0A0B4J1K2 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav9-4A0A0B4J1K2 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav9-4A0A0B4J1K2 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav9-4A0A0B4J1K2 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav9-4A0A0B4J1K2 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav9-4A0A0B4J1K2 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav9-4A0A0B4J1K2 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav9-4A0A0B4J1K2 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav9-4A0A0B4J1K2 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav9-4A0A0B4J1K2 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav9-4A0A0B4J1K2 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav9-4A0A0B4J1K2 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav9-4A0A0B4J1K2 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav9-4A0A0B4J1K2 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav9-4A0A0B4J1K2 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav9-4A0A0B4J1K2 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav9-4A0A0B4J1K2 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC13.55□□□□□ -0.24
Trav9-4A0A0B4J1K2 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav9-4A0A0B4J1K2 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav9-4A0A0B4J1K2 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav9-4A0A0B4J1K2 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav9-4A0A0B4J1K2 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC13.55□□□□□ -0.24
Trav9-4A0A0B4J1K2 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav9-4A0A0B4J1K2 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav9-4A0A0B4J1K2 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav9-4A0A0B4J1K2 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trav9-4A0A0B4J1K2 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav9-4A0A0B4J1K2 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trav9-4A0A0B4J1K2 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav9-4A0A0B4J1K2 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav9-4A0A0B4J1K2 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trav9-4A0A0B4J1K2 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav9-4A0A0B4J1K2 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trav9-4A0A0B4J1K2 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav9-4A0A0B4J1K2 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav9-4A0A0B4J1K2 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
Trav9-4A0A0B4J1K2 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trav9-4A0A0B4J1K2 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC13.54□□□□□ -0.24
Trav9-4A0A0B4J1K2 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trav9-4A0A0B4J1K2 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav9-4A0A0B4J1K2 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav9-4A0A0B4J1K2 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC13.54□□□□□ -0.24
Trav9-4A0A0B4J1K2 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav9-4A0A0B4J1K2 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav9-4A0A0B4J1K2 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav9-4A0A0B4J1K2 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav9-4A0A0B4J1K2 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav9-4A0A0B4J1K2 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9-4A0A0B4J1K2 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9-4A0A0B4J1K2 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trav9-4A0A0B4J1K2 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9-4A0A0B4J1K2 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC13.53□□□□□ -0.24
Trav9-4A0A0B4J1K2 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9-4A0A0B4J1K2 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9-4A0A0B4J1K2 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9-4A0A0B4J1K2 Gm44549-201ENSMUST00000208351 577 ntBASIC13.53□□□□□ -0.24
Trav9-4A0A0B4J1K2 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC13.53□□□□□ -0.24
Trav9-4A0A0B4J1K2 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trav9-4A0A0B4J1K2 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trav9-4A0A0B4J1K2 Fam105a-203ENSMUST00000226170 3043 ntBASIC13.53□□□□□ -0.24
Trav9-4A0A0B4J1K2 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trav9-4A0A0B4J1K2 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC13.53□□□□□ -0.24
Trav9-4A0A0B4J1K2 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9-4A0A0B4J1K2 AC121961.1-201ENSMUST00000218594 1779 ntBASIC13.53□□□□□ -0.24
Trav9-4A0A0B4J1K2 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav9-4A0A0B4J1K2 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav9-4A0A0B4J1K2 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC13.52□□□□□ -0.25
Trav9-4A0A0B4J1K2 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Trav9-4A0A0B4J1K2 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms