Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav4-3A0A0B4J1K1 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4-3A0A0B4J1K1 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4-3A0A0B4J1K1 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4-3A0A0B4J1K1 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4-3A0A0B4J1K1 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4-3A0A0B4J1K1 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4-3A0A0B4J1K1 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4-3A0A0B4J1K1 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4-3A0A0B4J1K1 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4-3A0A0B4J1K1 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4-3A0A0B4J1K1 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav4-3A0A0B4J1K1 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trav4-3A0A0B4J1K1 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4-3A0A0B4J1K1 Haglr-201ENSMUST00000100000 2085 ntBASIC12.34□□□□□ -0.43
Trav4-3A0A0B4J1K1 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-3A0A0B4J1K1 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Trav4-3A0A0B4J1K1 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trav4-3A0A0B4J1K1 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-3A0A0B4J1K1 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-3A0A0B4J1K1 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-3A0A0B4J1K1 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-3A0A0B4J1K1 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-3A0A0B4J1K1 AC121961.1-201ENSMUST00000218594 1779 ntBASIC12.34□□□□□ -0.43
Trav4-3A0A0B4J1K1 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-3A0A0B4J1K1 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-3A0A0B4J1K1 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-3A0A0B4J1K1 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-3A0A0B4J1K1 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-3A0A0B4J1K1 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-3A0A0B4J1K1 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-3A0A0B4J1K1 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trav4-3A0A0B4J1K1 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-3A0A0B4J1K1 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-3A0A0B4J1K1 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-3A0A0B4J1K1 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-3A0A0B4J1K1 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav4-3A0A0B4J1K1 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav4-3A0A0B4J1K1 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4-3A0A0B4J1K1 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4-3A0A0B4J1K1 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trav4-3A0A0B4J1K1 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4-3A0A0B4J1K1 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4-3A0A0B4J1K1 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC12.33□□□□□ -0.44
Trav4-3A0A0B4J1K1 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4-3A0A0B4J1K1 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4-3A0A0B4J1K1 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4-3A0A0B4J1K1 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4-3A0A0B4J1K1 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4-3A0A0B4J1K1 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav4-3A0A0B4J1K1 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4-3A0A0B4J1K1 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4-3A0A0B4J1K1 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4-3A0A0B4J1K1 Gm45412-201ENSMUST00000210217 2275 ntBASIC12.33□□□□□ -0.44
Trav4-3A0A0B4J1K1 Tgds-204ENSMUST00000228543 1594 ntBASIC12.33□□□□□ -0.44
Trav4-3A0A0B4J1K1 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4-3A0A0B4J1K1 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trav4-3A0A0B4J1K1 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4-3A0A0B4J1K1 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trav4-3A0A0B4J1K1 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4-3A0A0B4J1K1 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4-3A0A0B4J1K1 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4-3A0A0B4J1K1 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4-3A0A0B4J1K1 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4-3A0A0B4J1K1 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4-3A0A0B4J1K1 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4-3A0A0B4J1K1 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4-3A0A0B4J1K1 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4-3A0A0B4J1K1 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4-3A0A0B4J1K1 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4-3A0A0B4J1K1 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4-3A0A0B4J1K1 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4-3A0A0B4J1K1 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4-3A0A0B4J1K1 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4-3A0A0B4J1K1 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4-3A0A0B4J1K1 Gm42918-201ENSMUST00000199249 1580 ntBASIC12.32□□□□□ -0.44
Trav4-3A0A0B4J1K1 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4-3A0A0B4J1K1 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4-3A0A0B4J1K1 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4-3A0A0B4J1K1 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4-3A0A0B4J1K1 Gm11175-201ENSMUST00000116172 543 ntBASIC12.32□□□□□ -0.44
Trav4-3A0A0B4J1K1 Gm13238-201ENSMUST00000117655 780 ntBASIC12.32□□□□□ -0.44
Trav4-3A0A0B4J1K1 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4-3A0A0B4J1K1 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4-3A0A0B4J1K1 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4-3A0A0B4J1K1 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4-3A0A0B4J1K1 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4-3A0A0B4J1K1 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4-3A0A0B4J1K1 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4-3A0A0B4J1K1 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4-3A0A0B4J1K1 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav4-3A0A0B4J1K1 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4-3A0A0B4J1K1 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4-3A0A0B4J1K1 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4-3A0A0B4J1K1 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4-3A0A0B4J1K1 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4-3A0A0B4J1K1 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4-3A0A0B4J1K1 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4-3A0A0B4J1K1 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4-3A0A0B4J1K1 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms