Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.49■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.48■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.48■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.48■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Igkv5-43A0A0B4J1J2 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.47■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.47■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Igkv5-43A0A0B4J1J2 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.47■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Igkv5-43A0A0B4J1J2 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.46■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Gm11643-201ENSMUST00000119578 864 ntBASIC18.46■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Gm12382-201ENSMUST00000122005 922 ntBASIC18.46■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.46■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Igkv5-43A0A0B4J1J2 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.45■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.45■□□□□ 0.54
Igkv5-43A0A0B4J1J2 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.45■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.45■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Igkv5-43A0A0B4J1J2 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.44■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.44■□□□□ 0.54
Igkv5-43A0A0B4J1J2 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.44■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Mir5122-201ENSMUST00000175004 89 ntBASIC18.44■□□□□ 0.54
Igkv5-43A0A0B4J1J2 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.44■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.44■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.44■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.43■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Igkv5-43A0A0B4J1J2 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms