Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Trbv20A0A0B4J1H5 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv20A0A0B4J1H5 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC16.21■□□□□ 0.18
Trbv20A0A0B4J1H5 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.18
Trbv20A0A0B4J1H5 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv20A0A0B4J1H5 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv20A0A0B4J1H5 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv20A0A0B4J1H5 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv20A0A0B4J1H5 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
Trbv20A0A0B4J1H5 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.2■□□□□ 0.18
Trbv20A0A0B4J1H5 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv20A0A0B4J1H5 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv20A0A0B4J1H5 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv20A0A0B4J1H5 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC16.2■□□□□ 0.18
Trbv20A0A0B4J1H5 Gm5576-201ENSMUST00000075809 1236 ntBASIC16.2■□□□□ 0.18
Trbv20A0A0B4J1H5 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv20A0A0B4J1H5 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv20A0A0B4J1H5 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv20A0A0B4J1H5 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv20A0A0B4J1H5 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv20A0A0B4J1H5 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv20A0A0B4J1H5 AC165080.2-201ENSMUST00000217491 1530 ntBASIC16.19■□□□□ 0.18
Trbv20A0A0B4J1H5 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv20A0A0B4J1H5 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv20A0A0B4J1H5 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv20A0A0B4J1H5 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv20A0A0B4J1H5 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv20A0A0B4J1H5 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv20A0A0B4J1H5 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trbv20A0A0B4J1H5 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv20A0A0B4J1H5 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC16.19■□□□□ 0.18
Trbv20A0A0B4J1H5 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC16.19■□□□□ 0.18
Trbv20A0A0B4J1H5 Gm9207-201ENSMUST00000198773 1115 ntBASIC16.19■□□□□ 0.18
Trbv20A0A0B4J1H5 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.19■□□□□ 0.18
Trbv20A0A0B4J1H5 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv20A0A0B4J1H5 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv20A0A0B4J1H5 Gm9959-201ENSMUST00000068277 390 ntBASIC16.19■□□□□ 0.18
Trbv20A0A0B4J1H5 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv20A0A0B4J1H5 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv20A0A0B4J1H5 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv20A0A0B4J1H5 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trbv20A0A0B4J1H5 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv20A0A0B4J1H5 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv20A0A0B4J1H5 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv20A0A0B4J1H5 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv20A0A0B4J1H5 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv20A0A0B4J1H5 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv20A0A0B4J1H5 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv20A0A0B4J1H5 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.18■□□□□ 0.18
Trbv20A0A0B4J1H5 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv20A0A0B4J1H5 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.18■□□□□ 0.18
Trbv20A0A0B4J1H5 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.18■□□□□ 0.18
Trbv20A0A0B4J1H5 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv20A0A0B4J1H5 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv20A0A0B4J1H5 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trbv20A0A0B4J1H5 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trbv20A0A0B4J1H5 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv20A0A0B4J1H5 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv20A0A0B4J1H5 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv20A0A0B4J1H5 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Trbv20A0A0B4J1H5 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv20A0A0B4J1H5 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv20A0A0B4J1H5 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.17■□□□□ 0.18
Trbv20A0A0B4J1H5 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv20A0A0B4J1H5 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv20A0A0B4J1H5 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv20A0A0B4J1H5 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv20A0A0B4J1H5 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv20A0A0B4J1H5 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv20A0A0B4J1H5 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv20A0A0B4J1H5 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Trbv20A0A0B4J1H5 Gm7160-202ENSMUST00000188519 1027 ntBASIC16.17■□□□□ 0.18
Trbv20A0A0B4J1H5 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Trbv20A0A0B4J1H5 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.17■□□□□ 0.18
Trbv20A0A0B4J1H5 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Trbv20A0A0B4J1H5 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv20A0A0B4J1H5 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv20A0A0B4J1H5 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.16■□□□□ 0.18
Trbv20A0A0B4J1H5 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv20A0A0B4J1H5 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.16■□□□□ 0.18
Trbv20A0A0B4J1H5 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv20A0A0B4J1H5 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv20A0A0B4J1H5 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv20A0A0B4J1H5 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv20A0A0B4J1H5 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv20A0A0B4J1H5 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv20A0A0B4J1H5 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv20A0A0B4J1H5 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC16.16■□□□□ 0.18
Trbv20A0A0B4J1H5 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv20A0A0B4J1H5 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
Trbv20A0A0B4J1H5 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv20A0A0B4J1H5 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv20A0A0B4J1H5 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv20A0A0B4J1H5 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Trbv20A0A0B4J1H5 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv20A0A0B4J1H5 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv20A0A0B4J1H5 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.15■□□□□ 0.18
Trbv20A0A0B4J1H5 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv20A0A0B4J1H5 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Trbv20A0A0B4J1H5 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms