Protein–RNA interactions for Protein: A0A0B4J1H1

Trbv12-2, T cell receptor beta, variable 12-2 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-2A0A0B4J1H1 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.29□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.29□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.29□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Gm27801-201ENSMUST00000184174 223 ntBASIC14.29□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC14.29□□□□□ -0.12
Trbv12-2A0A0B4J1H1 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC14.29□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC14.29□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Gm12251-201ENSMUST00000117893 792 ntBASIC14.28□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Gm12922-201ENSMUST00000120626 809 ntBASIC14.28□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv12-2A0A0B4J1H1 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC14.28□□□□□ -0.12
Trbv12-2A0A0B4J1H1 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Gm8309-201ENSMUST00000206627 1448 ntBASIC14.27□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv12-2A0A0B4J1H1 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv12-2A0A0B4J1H1 Flvcr1-202ENSMUST00000191946 1216 ntBASIC14.27□□□□□ -0.13
Trbv12-2A0A0B4J1H1 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
Trbv12-2A0A0B4J1H1 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv12-2A0A0B4J1H1 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv12-2A0A0B4J1H1 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv12-2A0A0B4J1H1 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Trbv12-2A0A0B4J1H1 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv12-2A0A0B4J1H1 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv12-2A0A0B4J1H1 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv12-2A0A0B4J1H1 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Trbv12-2A0A0B4J1H1 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv12-2A0A0B4J1H1 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv12-2A0A0B4J1H1 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trbv12-2A0A0B4J1H1 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv12-2A0A0B4J1H1 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trbv12-2A0A0B4J1H1 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv12-2A0A0B4J1H1 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv12-2A0A0B4J1H1 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv12-2A0A0B4J1H1 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv12-2A0A0B4J1H1 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trbv12-2A0A0B4J1H1 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv12-2A0A0B4J1H1 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv12-2A0A0B4J1H1 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv12-2A0A0B4J1H1 Gm11421-201ENSMUST00000122124 294 ntBASIC14.26□□□□□ -0.13
Trbv12-2A0A0B4J1H1 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv12-2A0A0B4J1H1 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv12-2A0A0B4J1H1 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trbv12-2A0A0B4J1H1 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv12-2A0A0B4J1H1 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv12-2A0A0B4J1H1 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv12-2A0A0B4J1H1 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv12-2A0A0B4J1H1 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC14.25□□□□□ -0.13
Trbv12-2A0A0B4J1H1 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv12-2A0A0B4J1H1 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv12-2A0A0B4J1H1 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv12-2A0A0B4J1H1 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv12-2A0A0B4J1H1 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv12-2A0A0B4J1H1 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv12-2A0A0B4J1H1 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv12-2A0A0B4J1H1 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv12-2A0A0B4J1H1 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv12-2A0A0B4J1H1 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv12-2A0A0B4J1H1 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv12-2A0A0B4J1H1 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.25□□□□□ -0.13
Trbv12-2A0A0B4J1H1 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms