Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv5A0A0B4J1G9 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv5A0A0B4J1G9 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.55□□□□□ -0.08
Trbv5A0A0B4J1G9 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv5A0A0B4J1G9 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trbv5A0A0B4J1G9 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.55□□□□□ -0.08
Trbv5A0A0B4J1G9 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trbv5A0A0B4J1G9 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv5A0A0B4J1G9 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv5A0A0B4J1G9 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv5A0A0B4J1G9 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv5A0A0B4J1G9 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trbv5A0A0B4J1G9 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC14.55□□□□□ -0.08
Trbv5A0A0B4J1G9 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv5A0A0B4J1G9 Gm9194-201ENSMUST00000220749 1447 ntBASIC14.55□□□□□ -0.08
Trbv5A0A0B4J1G9 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv5A0A0B4J1G9 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.55□□□□□ -0.08
Trbv5A0A0B4J1G9 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv5A0A0B4J1G9 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trbv5A0A0B4J1G9 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv5A0A0B4J1G9 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv5A0A0B4J1G9 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv5A0A0B4J1G9 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.54□□□□□ -0.08
Trbv5A0A0B4J1G9 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv5A0A0B4J1G9 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv5A0A0B4J1G9 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trbv5A0A0B4J1G9 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trbv5A0A0B4J1G9 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv5A0A0B4J1G9 Gm7417-201ENSMUST00000192950 473 ntBASIC14.54□□□□□ -0.08
Trbv5A0A0B4J1G9 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv5A0A0B4J1G9 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv5A0A0B4J1G9 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.54□□□□□ -0.08
Trbv5A0A0B4J1G9 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv5A0A0B4J1G9 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.54□□□□□ -0.08
Trbv5A0A0B4J1G9 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv5A0A0B4J1G9 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv5A0A0B4J1G9 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv5A0A0B4J1G9 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv5A0A0B4J1G9 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv5A0A0B4J1G9 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv5A0A0B4J1G9 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv5A0A0B4J1G9 Gm10209-201ENSMUST00000203397 1607 ntBASIC14.53□□□□□ -0.08
Trbv5A0A0B4J1G9 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv5A0A0B4J1G9 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv5A0A0B4J1G9 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv5A0A0B4J1G9 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv5A0A0B4J1G9 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC14.53□□□□□ -0.08
Trbv5A0A0B4J1G9 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trbv5A0A0B4J1G9 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Trbv5A0A0B4J1G9 Gm5522-201ENSMUST00000189483 1242 ntBASIC14.53□□□□□ -0.08
Trbv5A0A0B4J1G9 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv5A0A0B4J1G9 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Trbv5A0A0B4J1G9 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trbv5A0A0B4J1G9 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv5A0A0B4J1G9 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trbv5A0A0B4J1G9 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trbv5A0A0B4J1G9 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Trbv5A0A0B4J1G9 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trbv5A0A0B4J1G9 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trbv5A0A0B4J1G9 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trbv5A0A0B4J1G9 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trbv5A0A0B4J1G9 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trbv5A0A0B4J1G9 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC14.52□□□□□ -0.09
Trbv5A0A0B4J1G9 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC14.52□□□□□ -0.09
Trbv5A0A0B4J1G9 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
Trbv5A0A0B4J1G9 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trbv5A0A0B4J1G9 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trbv5A0A0B4J1G9 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trbv5A0A0B4J1G9 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trbv5A0A0B4J1G9 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trbv5A0A0B4J1G9 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.52□□□□□ -0.09
Trbv5A0A0B4J1G9 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trbv5A0A0B4J1G9 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv5A0A0B4J1G9 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv5A0A0B4J1G9 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv5A0A0B4J1G9 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv5A0A0B4J1G9 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv5A0A0B4J1G9 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv5A0A0B4J1G9 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv5A0A0B4J1G9 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv5A0A0B4J1G9 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv5A0A0B4J1G9 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv5A0A0B4J1G9 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv5A0A0B4J1G9 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv5A0A0B4J1G9 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv5A0A0B4J1G9 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv5A0A0B4J1G9 Gm43672-201ENSMUST00000199072 1731 ntBASIC14.51□□□□□ -0.09
Trbv5A0A0B4J1G9 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trbv5A0A0B4J1G9 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv5A0A0B4J1G9 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv5A0A0B4J1G9 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trbv5A0A0B4J1G9 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trbv5A0A0B4J1G9 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv5A0A0B4J1G9 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Trbv5A0A0B4J1G9 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv5A0A0B4J1G9 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv5A0A0B4J1G9 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.5□□□□□ -0.09
Trbv5A0A0B4J1G9 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv5A0A0B4J1G9 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv5A0A0B4J1G9 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms